Gene : Phvul.001G203900 P. vulgaris v2.1
Defline:  (1 of 2) K02835 - peptide chain release factor 1 (prfA, MTRF1, MRF1) Genomic Order:  2021
Name:  ? Phvul.001G203900 Secondary Identifier:  ? PAC:37169602
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G203900 0.5kb upstream 0.5kb upstream 6990 true Chr01: 46224374-46231363 Phaseolus vulgaris
Phvul.001G203900 0.5kb upstream 0.5kb upstream 500 false Chr01: 46224374-46224873 Phaseolus vulgaris
Phvul.001G203900 0.5kb downstream 0.5kb downstream 6990 true Chr01: 46224874-46231863 Phaseolus vulgaris
Phvul.001G203900 0.5kb downstream 0.5kb downstream 500 false Chr01: 46231364-46231863 Phaseolus vulgaris
Phvul.001G203900 1.0kb upstream 1.0kb upstream 7490 true Chr01: 46223874-46231363 Phaseolus vulgaris
Phvul.001G203900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46223874-46224873 Phaseolus vulgaris
Phvul.001G203900 1.0kb downstream 1.0kb downstream 7490 true Chr01: 46224874-46232363 Phaseolus vulgaris
Phvul.001G203900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46231364-46232363 Phaseolus vulgaris
Phvul.001G203900 2.0kb upstream 2.0kb upstream 8490 true Chr01: 46222874-46231363 Phaseolus vulgaris
Phvul.001G203900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46222874-46224873 Phaseolus vulgaris
Phvul.001G203900 2.0kb downstream 2.0kb downstream 8490 true Chr01: 46224874-46233363 Phaseolus vulgaris
Phvul.001G203900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46231364-46233363 Phaseolus vulgaris
Phvul.001G203900 5.0kb upstream 5.0kb upstream 11490 true Chr01: 46219874-46231363 Phaseolus vulgaris
Phvul.001G203900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46219874-46224873 Phaseolus vulgaris
Phvul.001G203900 5.0kb downstream 5.0kb downstream 11490 true Chr01: 46224874-46236363 Phaseolus vulgaris
Phvul.001G203900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46231364-46236363 Phaseolus vulgaris
Phvul.001G203900 10.0kb upstream 10.0kb upstream 16490 true Chr01: 46214874-46231363 Phaseolus vulgaris
Phvul.001G203900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46214874-46224873 Phaseolus vulgaris
Phvul.001G203900 10.0kb downstream 10.0kb downstream 16490 true Chr01: 46224874-46241363 Phaseolus vulgaris
Phvul.001G203900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46231364-46241363 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041311 5273 Angiosperm View MSA
122306921 5265 Fabidae View MSA
124062646 5270 Rosid View MSA
123740537 5271 Pentapetalae View MSA
122789829 5272 Eudicot View MSA
121344986 5274 Embryophyte View MSA
123425120 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3127 0.0 27.6622    
cufflinks 9.89055 0.0 26.6273    
cufflinks 53.6946 0.0 142.276 High High
cufflinks 5.56429 0.0 15.8502    
cufflinks 7.39984 0.0 20.569    
cufflinks 28.5965 0.0 73.9601   High
cufflinks 4.47414 0.0 12.9152    
cufflinks 4.12825 0.0 12.0126    
cufflinks 3.92316 0.0 11.4889   Low
cufflinks 10.1367 0.0 27.2812    
cufflinks 6.63312 0.0 18.5422    

0 Strain