Gene : Phvul.001G201800 P. vulgaris v2.1
Defline:  (1 of 51) KOG0725 - Reductases with broad range of substrate specificities Genomic Order:  2000
Name:  ? Phvul.001G201800 Secondary Identifier:  ? PAC:37170237
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G201800 0.5kb upstream 0.5kb upstream 3241 true Chr01: 46047020-46050260 Phaseolus vulgaris
Phvul.001G201800 0.5kb upstream 0.5kb upstream 500 false Chr01: 46047020-46047519 Phaseolus vulgaris
Phvul.001G201800 0.5kb downstream 0.5kb downstream 3241 true Chr01: 46047520-46050760 Phaseolus vulgaris
Phvul.001G201800 0.5kb downstream 0.5kb downstream 500 false Chr01: 46050261-46050760 Phaseolus vulgaris
Phvul.001G201800 1.0kb upstream 1.0kb upstream 3741 true Chr01: 46046520-46050260 Phaseolus vulgaris
Phvul.001G201800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46046520-46047519 Phaseolus vulgaris
Phvul.001G201800 1.0kb downstream 1.0kb downstream 3741 true Chr01: 46047520-46051260 Phaseolus vulgaris
Phvul.001G201800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46050261-46051260 Phaseolus vulgaris
Phvul.001G201800 2.0kb upstream 2.0kb upstream 4741 true Chr01: 46045520-46050260 Phaseolus vulgaris
Phvul.001G201800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46045520-46047519 Phaseolus vulgaris
Phvul.001G201800 2.0kb downstream 2.0kb downstream 4741 true Chr01: 46047520-46052260 Phaseolus vulgaris
Phvul.001G201800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46050261-46052260 Phaseolus vulgaris
Phvul.001G201800 5.0kb upstream 5.0kb upstream 7741 true Chr01: 46042520-46050260 Phaseolus vulgaris
Phvul.001G201800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46042520-46047519 Phaseolus vulgaris
Phvul.001G201800 5.0kb downstream 5.0kb downstream 7741 true Chr01: 46047520-46055260 Phaseolus vulgaris
Phvul.001G201800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46050261-46055260 Phaseolus vulgaris
Phvul.001G201800 10.0kb upstream 10.0kb upstream 12741 true Chr01: 46037520-46050260 Phaseolus vulgaris
Phvul.001G201800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46037520-46047519 Phaseolus vulgaris
Phvul.001G201800 10.0kb downstream 10.0kb downstream 12741 true Chr01: 46047520-46060260 Phaseolus vulgaris
Phvul.001G201800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46050261-46060260 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299554 5265 Fabidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93676 0.0 20.0187    
cufflinks 6.24409 0.0 18.1954    
cufflinks 12.2394 0.0 33.3175   High
cufflinks 16.1384 0.0 43.4201   High
cufflinks 4.95618 0.0 14.9395    
cufflinks 6.25484 0.0 18.2022    
cufflinks 4.65762 0.0 14.0351    
cufflinks 7.55613 0.0 21.5052    
cufflinks 4.64436 0.0 14.0164    
cufflinks 5.44642 0.0 16.1823    
cufflinks 5.45618 0.0 16.2319    

0 Strain