Gene : Phvul.001G205701 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Genomic Order:  2040
Name:  ? Phvul.001G205701 Secondary Identifier:  ? PAC:37169196
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G205701 0.5kb upstream 0.5kb upstream 1129 true Chr01: 46347984-46349112 Phaseolus vulgaris
Phvul.001G205701 0.5kb upstream 0.5kb upstream 500 false Chr01: 46347984-46348483 Phaseolus vulgaris
Phvul.001G205701 0.5kb downstream 0.5kb downstream 1129 true Chr01: 46348484-46349612 Phaseolus vulgaris
Phvul.001G205701 0.5kb downstream 0.5kb downstream 500 false Chr01: 46349113-46349612 Phaseolus vulgaris
Phvul.001G205701 1.0kb upstream 1.0kb upstream 1629 true Chr01: 46347484-46349112 Phaseolus vulgaris
Phvul.001G205701 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46347484-46348483 Phaseolus vulgaris
Phvul.001G205701 1.0kb downstream 1.0kb downstream 1629 true Chr01: 46348484-46350112 Phaseolus vulgaris
Phvul.001G205701 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46349113-46350112 Phaseolus vulgaris
Phvul.001G205701 2.0kb upstream 2.0kb upstream 2629 true Chr01: 46346484-46349112 Phaseolus vulgaris
Phvul.001G205701 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46346484-46348483 Phaseolus vulgaris
Phvul.001G205701 2.0kb downstream 2.0kb downstream 2629 true Chr01: 46348484-46351112 Phaseolus vulgaris
Phvul.001G205701 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46349113-46351112 Phaseolus vulgaris
Phvul.001G205701 5.0kb upstream 5.0kb upstream 5629 true Chr01: 46343484-46349112 Phaseolus vulgaris
Phvul.001G205701 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46343484-46348483 Phaseolus vulgaris
Phvul.001G205701 5.0kb downstream 5.0kb downstream 5629 true Chr01: 46348484-46354112 Phaseolus vulgaris
Phvul.001G205701 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46349113-46354112 Phaseolus vulgaris
Phvul.001G205701 10.0kb upstream 10.0kb upstream 10629 true Chr01: 46338484-46349112 Phaseolus vulgaris
Phvul.001G205701 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46338484-46348483 Phaseolus vulgaris
Phvul.001G205701 10.0kb downstream 10.0kb downstream 10629 true Chr01: 46348484-46359112 Phaseolus vulgaris
Phvul.001G205701 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46349113-46359112 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046836 5273 Angiosperm View MSA
122312202 5265 Fabidae View MSA
124072222 5270 Rosid View MSA
123751331 5271 Pentapetalae View MSA
122796895 5272 Eudicot View MSA
121350011 5274 Embryophyte View MSA
123381540 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.390405 0.0 1.64499 Low  
cufflinks 0.278663 0.0 1.20617 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.47534 0.0 15.2082    
cufflinks 1.81726 0.0 6.73875    
cufflinks 5.56433 0.0 18.3604    
cufflinks 0.669289 0.0 2.68451    
cufflinks 3.01934 0.0 10.6512    
cufflinks 0.316719 0.0 1.35726 Low Low
cufflinks 20.088 0.0 57.5395   High

0 Strain