Gene : Phvul.001G193300 P. vulgaris v2.1
Genomic Order:  1912 Name:  ? Phvul.001G193300
Secondary Identifier:  ? PAC:37168564
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G193300 0.5kb upstream 0.5kb upstream 4215 true Chr01: 45205361-45209575 Phaseolus vulgaris
Phvul.001G193300 0.5kb upstream 0.5kb upstream 500 false Chr01: 45205361-45205860 Phaseolus vulgaris
Phvul.001G193300 0.5kb downstream 0.5kb downstream 4215 true Chr01: 45205861-45210075 Phaseolus vulgaris
Phvul.001G193300 0.5kb downstream 0.5kb downstream 500 false Chr01: 45209576-45210075 Phaseolus vulgaris
Phvul.001G193300 1.0kb upstream 1.0kb upstream 4715 true Chr01: 45204861-45209575 Phaseolus vulgaris
Phvul.001G193300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45204861-45205860 Phaseolus vulgaris
Phvul.001G193300 1.0kb downstream 1.0kb downstream 4715 true Chr01: 45205861-45210575 Phaseolus vulgaris
Phvul.001G193300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45209576-45210575 Phaseolus vulgaris
Phvul.001G193300 2.0kb upstream 2.0kb upstream 5715 true Chr01: 45203861-45209575 Phaseolus vulgaris
Phvul.001G193300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45203861-45205860 Phaseolus vulgaris
Phvul.001G193300 2.0kb downstream 2.0kb downstream 5715 true Chr01: 45205861-45211575 Phaseolus vulgaris
Phvul.001G193300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45209576-45211575 Phaseolus vulgaris
Phvul.001G193300 5.0kb upstream 5.0kb upstream 8715 true Chr01: 45200861-45209575 Phaseolus vulgaris
Phvul.001G193300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45200861-45205860 Phaseolus vulgaris
Phvul.001G193300 5.0kb downstream 5.0kb downstream 8715 true Chr01: 45205861-45214575 Phaseolus vulgaris
Phvul.001G193300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45209576-45214575 Phaseolus vulgaris
Phvul.001G193300 10.0kb upstream 10.0kb upstream 13715 true Chr01: 45195861-45209575 Phaseolus vulgaris
Phvul.001G193300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45195861-45205860 Phaseolus vulgaris
Phvul.001G193300 10.0kb downstream 10.0kb downstream 13715 true Chr01: 45205861-45219575 Phaseolus vulgaris
Phvul.001G193300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45209576-45219575 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300052 5265 Fabidae View MSA
124062346 5270 Rosid View MSA
123742419 5271 Pentapetalae View MSA
122786965 5272 Eudicot View MSA
122050340 5273 Angiosperm View MSA
121351123 5274 Embryophyte View MSA
123382016 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.90926 0.0 10.8755   Low
cufflinks 15.3879 0.0 39.7796    
cufflinks 8.23508 0.0 21.5878    
cufflinks 8.81998 0.0 23.1222    
cufflinks 12.6959 0.0 32.8563    
cufflinks 15.2002 0.0 39.2936    
cufflinks 11.9085 0.0 30.8092    
cufflinks 11.6917 0.0 30.2595    
cufflinks 13.2698 0.0 34.3048    
cufflinks 9.10439 0.0 23.7919    
cufflinks 18.3297 0.0 47.4846   High

0 Strain