Gene : Phvul.001G192000 P. vulgaris v2.1
Defline:  (1 of 91) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1899
Name:  ? Phvul.001G192000 Secondary Identifier:  ? PAC:37168142
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G192000 0.5kb upstream 0.5kb upstream 2673 true Chr01: 45081272-45083944 Phaseolus vulgaris
Phvul.001G192000 0.5kb upstream 0.5kb upstream 500 false Chr01: 45081272-45081771 Phaseolus vulgaris
Phvul.001G192000 0.5kb downstream 0.5kb downstream 2673 true Chr01: 45081772-45084444 Phaseolus vulgaris
Phvul.001G192000 0.5kb downstream 0.5kb downstream 500 false Chr01: 45083945-45084444 Phaseolus vulgaris
Phvul.001G192000 1.0kb upstream 1.0kb upstream 3173 true Chr01: 45080772-45083944 Phaseolus vulgaris
Phvul.001G192000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45080772-45081771 Phaseolus vulgaris
Phvul.001G192000 1.0kb downstream 1.0kb downstream 3173 true Chr01: 45081772-45084944 Phaseolus vulgaris
Phvul.001G192000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45083945-45084944 Phaseolus vulgaris
Phvul.001G192000 2.0kb upstream 2.0kb upstream 4173 true Chr01: 45079772-45083944 Phaseolus vulgaris
Phvul.001G192000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45079772-45081771 Phaseolus vulgaris
Phvul.001G192000 2.0kb downstream 2.0kb downstream 4173 true Chr01: 45081772-45085944 Phaseolus vulgaris
Phvul.001G192000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45083945-45085944 Phaseolus vulgaris
Phvul.001G192000 5.0kb upstream 5.0kb upstream 7173 true Chr01: 45076772-45083944 Phaseolus vulgaris
Phvul.001G192000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45076772-45081771 Phaseolus vulgaris
Phvul.001G192000 5.0kb downstream 5.0kb downstream 7173 true Chr01: 45081772-45088944 Phaseolus vulgaris
Phvul.001G192000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45083945-45088944 Phaseolus vulgaris
Phvul.001G192000 10.0kb upstream 10.0kb upstream 12173 true Chr01: 45071772-45083944 Phaseolus vulgaris
Phvul.001G192000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45071772-45081771 Phaseolus vulgaris
Phvul.001G192000 10.0kb downstream 10.0kb downstream 12173 true Chr01: 45081772-45093944 Phaseolus vulgaris
Phvul.001G192000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45083945-45093944 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303450 5265 Fabidae View MSA
124070729 5270 Rosid View MSA
123746448 5271 Pentapetalae View MSA
122785794 5272 Eudicot View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.61226 0.0 2.32814    
cufflinks 0.639765 0.0 2.42572   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.330215 0.0 1.32389 Low  
cufflinks 0.062706 0.0 0.29444 Low Low
cufflinks 0.21764 0.0 0.897638 Low  
cufflinks 0.320866 0.0 1.2773 Low  
cufflinks 0.157266 0.0 0.663099 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.5888 0.0 2.2535    
cufflinks 0.311993 0.0 1.25335 Low  

0 Strain