Gene : Phvul.001G193500 P. vulgaris v2.1
Defline:  (1 of 31) PF08659 - KR domain (KR) Genomic Order:  1914
Name:  ? Phvul.001G193500 Secondary Identifier:  ? PAC:37168009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G193500 0.5kb upstream 0.5kb upstream 1797 true Chr01: 45220963-45222759 Phaseolus vulgaris
Phvul.001G193500 0.5kb upstream 0.5kb upstream 500 false Chr01: 45220963-45221462 Phaseolus vulgaris
Phvul.001G193500 0.5kb downstream 0.5kb downstream 1797 true Chr01: 45221463-45223259 Phaseolus vulgaris
Phvul.001G193500 0.5kb downstream 0.5kb downstream 500 false Chr01: 45222760-45223259 Phaseolus vulgaris
Phvul.001G193500 1.0kb upstream 1.0kb upstream 2297 true Chr01: 45220463-45222759 Phaseolus vulgaris
Phvul.001G193500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45220463-45221462 Phaseolus vulgaris
Phvul.001G193500 1.0kb downstream 1.0kb downstream 2297 true Chr01: 45221463-45223759 Phaseolus vulgaris
Phvul.001G193500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45222760-45223759 Phaseolus vulgaris
Phvul.001G193500 2.0kb upstream 2.0kb upstream 3297 true Chr01: 45219463-45222759 Phaseolus vulgaris
Phvul.001G193500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45219463-45221462 Phaseolus vulgaris
Phvul.001G193500 2.0kb downstream 2.0kb downstream 3297 true Chr01: 45221463-45224759 Phaseolus vulgaris
Phvul.001G193500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45222760-45224759 Phaseolus vulgaris
Phvul.001G193500 5.0kb upstream 5.0kb upstream 6297 true Chr01: 45216463-45222759 Phaseolus vulgaris
Phvul.001G193500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45216463-45221462 Phaseolus vulgaris
Phvul.001G193500 5.0kb downstream 5.0kb downstream 6297 true Chr01: 45221463-45227759 Phaseolus vulgaris
Phvul.001G193500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45222760-45227759 Phaseolus vulgaris
Phvul.001G193500 10.0kb upstream 10.0kb upstream 11297 true Chr01: 45211463-45222759 Phaseolus vulgaris
Phvul.001G193500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45211463-45221462 Phaseolus vulgaris
Phvul.001G193500 10.0kb downstream 10.0kb downstream 11297 true Chr01: 45221463-45232759 Phaseolus vulgaris
Phvul.001G193500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45222760-45232759 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308941 5265 Fabidae View MSA
124071741 5270 Rosid View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.625749 0.0 2.33218    
cufflinks 0.333647 0.0 1.30864 Low  
cufflinks 0.562354 0.0 2.12828 Low  
cufflinks 0.199324 0.0 0.813418 Low  
cufflinks 9.257 0.0 26.0409   High
cufflinks 2.27616 0.0 7.45174    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0144454 0.0 0.0772669 Low Low
cufflinks 7.56826 0.0 21.5985   High

0 Strain