Gene : Phvul.001G194020 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33057:SF17 - GB Genomic Order:  1920
Name:  ? Phvul.001G194020 Secondary Identifier:  ? PAC:37170796
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G194020 0.5kb upstream 0.5kb upstream 2063 true Chr01: 45317455-45319517 Phaseolus vulgaris
Phvul.001G194020 0.5kb upstream 0.5kb upstream 500 false Chr01: 45319018-45319517 Phaseolus vulgaris
Phvul.001G194020 0.5kb downstream 0.5kb downstream 2063 true Chr01: 45316955-45319017 Phaseolus vulgaris
Phvul.001G194020 0.5kb downstream 0.5kb downstream 500 false Chr01: 45316955-45317454 Phaseolus vulgaris
Phvul.001G194020 1.0kb upstream 1.0kb upstream 2563 true Chr01: 45317455-45320017 Phaseolus vulgaris
Phvul.001G194020 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45319018-45320017 Phaseolus vulgaris
Phvul.001G194020 1.0kb downstream 1.0kb downstream 2563 true Chr01: 45316455-45319017 Phaseolus vulgaris
Phvul.001G194020 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45316455-45317454 Phaseolus vulgaris
Phvul.001G194020 2.0kb upstream 2.0kb upstream 3563 true Chr01: 45317455-45321017 Phaseolus vulgaris
Phvul.001G194020 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45319018-45321017 Phaseolus vulgaris
Phvul.001G194020 2.0kb downstream 2.0kb downstream 3563 true Chr01: 45315455-45319017 Phaseolus vulgaris
Phvul.001G194020 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45315455-45317454 Phaseolus vulgaris
Phvul.001G194020 5.0kb upstream 5.0kb upstream 6563 true Chr01: 45317455-45324017 Phaseolus vulgaris
Phvul.001G194020 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45319018-45324017 Phaseolus vulgaris
Phvul.001G194020 5.0kb downstream 5.0kb downstream 6563 true Chr01: 45312455-45319017 Phaseolus vulgaris
Phvul.001G194020 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45312455-45317454 Phaseolus vulgaris
Phvul.001G194020 10.0kb upstream 10.0kb upstream 11563 true Chr01: 45317455-45329017 Phaseolus vulgaris
Phvul.001G194020 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45319018-45329017 Phaseolus vulgaris
Phvul.001G194020 10.0kb downstream 10.0kb downstream 11563 true Chr01: 45307455-45319017 Phaseolus vulgaris
Phvul.001G194020 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45307455-45317454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.638827 0.0 2.47781    
cufflinks 3.01568 0.0 10.1214    
cufflinks 2.15953 0.0 7.53227    
cufflinks 1.42943 0.0 5.16255    
cufflinks 0.633457 0.0 2.46835    
cufflinks 0.533386 0.0 2.09973 Low  
cufflinks 2.85119 0.0 9.56005    
cufflinks 14.4144 0.0 40.5672   High
cufflinks 1.40975 0.0 5.08175    
cufflinks 0.0749016 0.0 0.353871 Low Low
cufflinks 0.222107 0.0 0.936613 Low Low

0 Strain