Gene : Phvul.001G199200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10627//PTHR10627:SF43 - SCP160 // SUBFAMILY NOT NAMED Genomic Order:  1973
Name:  ? Phvul.001G199200 Secondary Identifier:  ? PAC:37168949
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G199200 0.5kb upstream 0.5kb upstream 2515 true Chr01: 45828609-45831123 Phaseolus vulgaris
Phvul.001G199200 0.5kb upstream 0.5kb upstream 500 false Chr01: 45828609-45829108 Phaseolus vulgaris
Phvul.001G199200 0.5kb downstream 0.5kb downstream 2515 true Chr01: 45829109-45831623 Phaseolus vulgaris
Phvul.001G199200 0.5kb downstream 0.5kb downstream 500 false Chr01: 45831124-45831623 Phaseolus vulgaris
Phvul.001G199200 1.0kb upstream 1.0kb upstream 3015 true Chr01: 45828109-45831123 Phaseolus vulgaris
Phvul.001G199200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 45828109-45829108 Phaseolus vulgaris
Phvul.001G199200 1.0kb downstream 1.0kb downstream 3015 true Chr01: 45829109-45832123 Phaseolus vulgaris
Phvul.001G199200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 45831124-45832123 Phaseolus vulgaris
Phvul.001G199200 2.0kb upstream 2.0kb upstream 4015 true Chr01: 45827109-45831123 Phaseolus vulgaris
Phvul.001G199200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 45827109-45829108 Phaseolus vulgaris
Phvul.001G199200 2.0kb downstream 2.0kb downstream 4015 true Chr01: 45829109-45833123 Phaseolus vulgaris
Phvul.001G199200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 45831124-45833123 Phaseolus vulgaris
Phvul.001G199200 5.0kb upstream 5.0kb upstream 7015 true Chr01: 45824109-45831123 Phaseolus vulgaris
Phvul.001G199200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 45824109-45829108 Phaseolus vulgaris
Phvul.001G199200 5.0kb downstream 5.0kb downstream 7015 true Chr01: 45829109-45836123 Phaseolus vulgaris
Phvul.001G199200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 45831124-45836123 Phaseolus vulgaris
Phvul.001G199200 10.0kb upstream 10.0kb upstream 12015 true Chr01: 45819109-45831123 Phaseolus vulgaris
Phvul.001G199200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 45819109-45829108 Phaseolus vulgaris
Phvul.001G199200 10.0kb downstream 10.0kb downstream 12015 true Chr01: 45829109-45841123 Phaseolus vulgaris
Phvul.001G199200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 45831124-45841123 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305870 5265 Fabidae View MSA
124070346 5270 Rosid View MSA
123742337 5271 Pentapetalae View MSA
122794270 5272 Eudicot View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0889 0.0 33.8981   High
cufflinks 7.16928 0.0 21.1996    
cufflinks 5.63671 0.0 17.0503    
cufflinks 7.8952 0.0 23.2196    
cufflinks 4.4414 0.0 14.0198   Low
cufflinks 5.58876 0.0 16.9881    
cufflinks 4.9432 0.0 15.2367    
cufflinks 5.75393 0.0 17.2806    
cufflinks 4.2894 0.0 13.4588   Low
cufflinks 5.53539 0.0 16.9179    
cufflinks 6.48561 0.0 19.5289    

0 Strain