Gene : Phvul.001G183500 P. vulgaris v2.1
Defline:  (1 of 2) K12185 - ESCRT-I complex subunit VPS37 (VPS37) Genomic Order:  1813
Name:  ? Phvul.001G183500 Secondary Identifier:  ? PAC:37167862
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G183500 0.5kb upstream 0.5kb upstream 5977 true Chr01: 44150870-44156846 Phaseolus vulgaris
Phvul.001G183500 0.5kb upstream 0.5kb upstream 500 false Chr01: 44150870-44151369 Phaseolus vulgaris
Phvul.001G183500 0.5kb downstream 0.5kb downstream 5977 true Chr01: 44151370-44157346 Phaseolus vulgaris
Phvul.001G183500 0.5kb downstream 0.5kb downstream 500 false Chr01: 44156847-44157346 Phaseolus vulgaris
Phvul.001G183500 1.0kb upstream 1.0kb upstream 6477 true Chr01: 44150370-44156846 Phaseolus vulgaris
Phvul.001G183500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44150370-44151369 Phaseolus vulgaris
Phvul.001G183500 1.0kb downstream 1.0kb downstream 6477 true Chr01: 44151370-44157846 Phaseolus vulgaris
Phvul.001G183500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44156847-44157846 Phaseolus vulgaris
Phvul.001G183500 2.0kb upstream 2.0kb upstream 7477 true Chr01: 44149370-44156846 Phaseolus vulgaris
Phvul.001G183500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44149370-44151369 Phaseolus vulgaris
Phvul.001G183500 2.0kb downstream 2.0kb downstream 7477 true Chr01: 44151370-44158846 Phaseolus vulgaris
Phvul.001G183500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44156847-44158846 Phaseolus vulgaris
Phvul.001G183500 5.0kb upstream 5.0kb upstream 10477 true Chr01: 44146370-44156846 Phaseolus vulgaris
Phvul.001G183500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44146370-44151369 Phaseolus vulgaris
Phvul.001G183500 5.0kb downstream 5.0kb downstream 10477 true Chr01: 44151370-44161846 Phaseolus vulgaris
Phvul.001G183500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44156847-44161846 Phaseolus vulgaris
Phvul.001G183500 10.0kb upstream 10.0kb upstream 15477 true Chr01: 44141370-44156846 Phaseolus vulgaris
Phvul.001G183500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44141370-44151369 Phaseolus vulgaris
Phvul.001G183500 10.0kb downstream 10.0kb downstream 15477 true Chr01: 44151370-44166846 Phaseolus vulgaris
Phvul.001G183500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44156847-44166846 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308800 5265 Fabidae View MSA
124068328 5270 Rosid View MSA
123746105 5271 Pentapetalae View MSA
122791757 5272 Eudicot View MSA
122041656 5273 Angiosperm View MSA
121345177 5274 Embryophyte View MSA
123424411 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.7768 0.0 72.3525   High
cufflinks 11.147 0.0 31.0058    
cufflinks 9.31304 0.0 26.2413    
cufflinks 21.6116 0.0 57.1193   High
cufflinks 11.5555 0.0 32.2517    
cufflinks 7.78488 0.0 22.4237   Low
cufflinks 12.3105 0.0 34.022    
cufflinks 12.8238 0.0 35.1217    
cufflinks 13.0668 0.0 35.9341    
cufflinks 11.3765 0.0 31.5814    
cufflinks 14.933 0.0 40.6634    

0 Strain