Gene : Phvul.001G184000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21737:SF4 - CACTIN Genomic Order:  1818
Name:  ? Phvul.001G184000 Secondary Identifier:  ? PAC:37168299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G184000 0.5kb upstream 0.5kb upstream 5809 true Chr01: 44199254-44205062 Phaseolus vulgaris
Phvul.001G184000 0.5kb upstream 0.5kb upstream 500 false Chr01: 44199254-44199753 Phaseolus vulgaris
Phvul.001G184000 0.5kb downstream 0.5kb downstream 5809 true Chr01: 44199754-44205562 Phaseolus vulgaris
Phvul.001G184000 0.5kb downstream 0.5kb downstream 500 false Chr01: 44205063-44205562 Phaseolus vulgaris
Phvul.001G184000 1.0kb upstream 1.0kb upstream 6309 true Chr01: 44198754-44205062 Phaseolus vulgaris
Phvul.001G184000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44198754-44199753 Phaseolus vulgaris
Phvul.001G184000 1.0kb downstream 1.0kb downstream 6309 true Chr01: 44199754-44206062 Phaseolus vulgaris
Phvul.001G184000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44205063-44206062 Phaseolus vulgaris
Phvul.001G184000 2.0kb upstream 2.0kb upstream 7309 true Chr01: 44197754-44205062 Phaseolus vulgaris
Phvul.001G184000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44197754-44199753 Phaseolus vulgaris
Phvul.001G184000 2.0kb downstream 2.0kb downstream 7309 true Chr01: 44199754-44207062 Phaseolus vulgaris
Phvul.001G184000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44205063-44207062 Phaseolus vulgaris
Phvul.001G184000 5.0kb upstream 5.0kb upstream 10309 true Chr01: 44194754-44205062 Phaseolus vulgaris
Phvul.001G184000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44194754-44199753 Phaseolus vulgaris
Phvul.001G184000 5.0kb downstream 5.0kb downstream 10309 true Chr01: 44199754-44210062 Phaseolus vulgaris
Phvul.001G184000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44205063-44210062 Phaseolus vulgaris
Phvul.001G184000 10.0kb upstream 10.0kb upstream 15309 true Chr01: 44189754-44205062 Phaseolus vulgaris
Phvul.001G184000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44189754-44199753 Phaseolus vulgaris
Phvul.001G184000 10.0kb downstream 10.0kb downstream 15309 true Chr01: 44199754-44215062 Phaseolus vulgaris
Phvul.001G184000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44205063-44215062 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311471 5265 Fabidae View MSA
124062313 5270 Rosid View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7578 0.0 35.5678   Low
cufflinks 17.9783 0.0 46.5676    
cufflinks 17.9381 0.0 46.4599    
cufflinks 10.7807 0.0 28.0661   Low
cufflinks 16.1148 0.0 41.6539    
cufflinks 18.0963 0.0 46.8971    
cufflinks 22.5304 0.0 58.8507    
cufflinks 19.3955 0.0 50.4082    
cufflinks 22.4467 0.0 58.591    
cufflinks 24.5635 0.0 64.2428   High
cufflinks 18.5655 0.0 48.0793    

0 Strain