Gene : Phvul.001G184600 P. vulgaris v2.1
Defline:  (1 of 2) PF02987 - Late embryogenesis abundant protein (LEA_4) Genomic Order:  1824
Name:  ? Phvul.001G184600 Secondary Identifier:  ? PAC:37170812
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G184600 0.5kb upstream 0.5kb upstream 1723 true Chr01: 44256700-44258422 Phaseolus vulgaris
Phvul.001G184600 0.5kb upstream 0.5kb upstream 500 false Chr01: 44256700-44257199 Phaseolus vulgaris
Phvul.001G184600 0.5kb downstream 0.5kb downstream 1723 true Chr01: 44257200-44258922 Phaseolus vulgaris
Phvul.001G184600 0.5kb downstream 0.5kb downstream 500 false Chr01: 44258423-44258922 Phaseolus vulgaris
Phvul.001G184600 1.0kb upstream 1.0kb upstream 2223 true Chr01: 44256200-44258422 Phaseolus vulgaris
Phvul.001G184600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44256200-44257199 Phaseolus vulgaris
Phvul.001G184600 1.0kb downstream 1.0kb downstream 2223 true Chr01: 44257200-44259422 Phaseolus vulgaris
Phvul.001G184600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44258423-44259422 Phaseolus vulgaris
Phvul.001G184600 2.0kb upstream 2.0kb upstream 3223 true Chr01: 44255200-44258422 Phaseolus vulgaris
Phvul.001G184600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44255200-44257199 Phaseolus vulgaris
Phvul.001G184600 2.0kb downstream 2.0kb downstream 3223 true Chr01: 44257200-44260422 Phaseolus vulgaris
Phvul.001G184600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44258423-44260422 Phaseolus vulgaris
Phvul.001G184600 5.0kb upstream 5.0kb upstream 6223 true Chr01: 44252200-44258422 Phaseolus vulgaris
Phvul.001G184600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44252200-44257199 Phaseolus vulgaris
Phvul.001G184600 5.0kb downstream 5.0kb downstream 6223 true Chr01: 44257200-44263422 Phaseolus vulgaris
Phvul.001G184600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44258423-44263422 Phaseolus vulgaris
Phvul.001G184600 10.0kb upstream 10.0kb upstream 11223 true Chr01: 44247200-44258422 Phaseolus vulgaris
Phvul.001G184600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44247200-44257199 Phaseolus vulgaris
Phvul.001G184600 10.0kb downstream 10.0kb downstream 11223 true Chr01: 44257200-44268422 Phaseolus vulgaris
Phvul.001G184600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44258423-44268422 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315105 5265 Fabidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.350186 0.0 1.31504 Low  
cufflinks 1.36287 0.0 4.46286   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0646343 0.0 0.280284 Low  
cufflinks 0.148067 0.0 0.598508 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.168968 0.0 0.667142 Low  
cufflinks 0.0132803 0.0 0.0672412 Low Low
cufflinks 0.054008 0.0 0.234553 Low  
cufflinks 0.0268661 0.0 0.126928 Low  
cufflinks 0.0656048 0.0 0.282344 Low  

0 Strain