Gene : Phvul.001G187500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31602:SF12 - GROWTH-REGULATING FACTOR 3-RELATED Genomic Order:  1854
Name:  ? Phvul.001G187500 Secondary Identifier:  ? PAC:37169307
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G187500 0.5kb upstream 0.5kb upstream 3806 true Chr01: 44659676-44663481 Phaseolus vulgaris
Phvul.001G187500 0.5kb upstream 0.5kb upstream 500 false Chr01: 44659676-44660175 Phaseolus vulgaris
Phvul.001G187500 0.5kb downstream 0.5kb downstream 3806 true Chr01: 44660176-44663981 Phaseolus vulgaris
Phvul.001G187500 0.5kb downstream 0.5kb downstream 500 false Chr01: 44663482-44663981 Phaseolus vulgaris
Phvul.001G187500 1.0kb upstream 1.0kb upstream 4306 true Chr01: 44659176-44663481 Phaseolus vulgaris
Phvul.001G187500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44659176-44660175 Phaseolus vulgaris
Phvul.001G187500 1.0kb downstream 1.0kb downstream 4306 true Chr01: 44660176-44664481 Phaseolus vulgaris
Phvul.001G187500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44663482-44664481 Phaseolus vulgaris
Phvul.001G187500 2.0kb upstream 2.0kb upstream 5306 true Chr01: 44658176-44663481 Phaseolus vulgaris
Phvul.001G187500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44658176-44660175 Phaseolus vulgaris
Phvul.001G187500 2.0kb downstream 2.0kb downstream 5306 true Chr01: 44660176-44665481 Phaseolus vulgaris
Phvul.001G187500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44663482-44665481 Phaseolus vulgaris
Phvul.001G187500 5.0kb upstream 5.0kb upstream 8306 true Chr01: 44655176-44663481 Phaseolus vulgaris
Phvul.001G187500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44655176-44660175 Phaseolus vulgaris
Phvul.001G187500 5.0kb downstream 5.0kb downstream 8306 true Chr01: 44660176-44668481 Phaseolus vulgaris
Phvul.001G187500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44663482-44668481 Phaseolus vulgaris
Phvul.001G187500 10.0kb upstream 10.0kb upstream 13306 true Chr01: 44650176-44663481 Phaseolus vulgaris
Phvul.001G187500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44650176-44660175 Phaseolus vulgaris
Phvul.001G187500 10.0kb downstream 10.0kb downstream 13306 true Chr01: 44660176-44673481 Phaseolus vulgaris
Phvul.001G187500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44663482-44673481 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306490 5265 Fabidae View MSA
124066495 5270 Rosid View MSA
123749792 5271 Pentapetalae View MSA
122797336 5272 Eudicot View MSA
122049590 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.38661 0.0 20.3514    
cufflinks 1.90437 0.0 6.05049    
cufflinks 1.0521 0.0 3.58982    
cufflinks 6.09304 0.0 17.086    
cufflinks 3.54596 0.0 10.5217    
cufflinks 2.8558 0.0 8.66438    
cufflinks 2.27772 0.0 7.04701    
cufflinks 1.90477 0.0 6.03028    
cufflinks 3.3904 0.0 10.0324    
cufflinks 0.0751982 0.0 0.322252 Low Low
cufflinks 4.48815 0.0 12.943    

0 Strain