Gene : Phvul.001G190100 P. vulgaris v2.1
Defline:  (1 of 2) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  1880
Name:  ? Phvul.001G190100 Secondary Identifier:  ? PAC:37168131
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6545 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7184 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7210 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7226 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7227 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7228 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7229 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G190100 0.5kb upstream 0.5kb upstream 1785 true Chr01: 44918477-44920261 Phaseolus vulgaris
Phvul.001G190100 0.5kb upstream 0.5kb upstream 500 false Chr01: 44918477-44918976 Phaseolus vulgaris
Phvul.001G190100 0.5kb downstream 0.5kb downstream 1785 true Chr01: 44918977-44920761 Phaseolus vulgaris
Phvul.001G190100 0.5kb downstream 0.5kb downstream 500 false Chr01: 44920262-44920761 Phaseolus vulgaris
Phvul.001G190100 1.0kb upstream 1.0kb upstream 2285 true Chr01: 44917977-44920261 Phaseolus vulgaris
Phvul.001G190100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44917977-44918976 Phaseolus vulgaris
Phvul.001G190100 1.0kb downstream 1.0kb downstream 2285 true Chr01: 44918977-44921261 Phaseolus vulgaris
Phvul.001G190100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44920262-44921261 Phaseolus vulgaris
Phvul.001G190100 2.0kb upstream 2.0kb upstream 3285 true Chr01: 44916977-44920261 Phaseolus vulgaris
Phvul.001G190100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44916977-44918976 Phaseolus vulgaris
Phvul.001G190100 2.0kb downstream 2.0kb downstream 3285 true Chr01: 44918977-44922261 Phaseolus vulgaris
Phvul.001G190100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44920262-44922261 Phaseolus vulgaris
Phvul.001G190100 5.0kb upstream 5.0kb upstream 6285 true Chr01: 44913977-44920261 Phaseolus vulgaris
Phvul.001G190100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44913977-44918976 Phaseolus vulgaris
Phvul.001G190100 5.0kb downstream 5.0kb downstream 6285 true Chr01: 44918977-44925261 Phaseolus vulgaris
Phvul.001G190100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44920262-44925261 Phaseolus vulgaris
Phvul.001G190100 10.0kb upstream 10.0kb upstream 11285 true Chr01: 44908977-44920261 Phaseolus vulgaris
Phvul.001G190100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44908977-44918976 Phaseolus vulgaris
Phvul.001G190100 10.0kb downstream 10.0kb downstream 11285 true Chr01: 44918977-44930261 Phaseolus vulgaris
Phvul.001G190100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44920262-44930261 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0451 0.0 27.8063    
cufflinks 36.0619 0.0 93.2232 High High
cufflinks 24.8246 0.0 64.8225    
cufflinks 13.4505 0.0 36.1025    
cufflinks 28.9689 0.0 74.978    
cufflinks 20.8548 0.0 54.8628    
cufflinks 14.9007 0.0 39.849    
cufflinks 17.4377 0.0 46.4279    
cufflinks 14.0825 0.0 37.892    
cufflinks 3.19265 0.0 10.0352   Low
cufflinks 24.3462 0.0 63.3233    

0 Strain