Gene : Phvul.001G189100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  1870
Name:  ? Phvul.001G189100 Secondary Identifier:  ? PAC:37168100
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G189100 0.5kb upstream 0.5kb upstream 1588 true Chr01: 44844466-44846053 Phaseolus vulgaris
Phvul.001G189100 0.5kb upstream 0.5kb upstream 500 false Chr01: 44844466-44844965 Phaseolus vulgaris
Phvul.001G189100 0.5kb downstream 0.5kb downstream 1588 true Chr01: 44844966-44846553 Phaseolus vulgaris
Phvul.001G189100 0.5kb downstream 0.5kb downstream 500 false Chr01: 44846054-44846553 Phaseolus vulgaris
Phvul.001G189100 1.0kb upstream 1.0kb upstream 2088 true Chr01: 44843966-44846053 Phaseolus vulgaris
Phvul.001G189100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44843966-44844965 Phaseolus vulgaris
Phvul.001G189100 1.0kb downstream 1.0kb downstream 2088 true Chr01: 44844966-44847053 Phaseolus vulgaris
Phvul.001G189100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44846054-44847053 Phaseolus vulgaris
Phvul.001G189100 2.0kb upstream 2.0kb upstream 3088 true Chr01: 44842966-44846053 Phaseolus vulgaris
Phvul.001G189100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44842966-44844965 Phaseolus vulgaris
Phvul.001G189100 2.0kb downstream 2.0kb downstream 3088 true Chr01: 44844966-44848053 Phaseolus vulgaris
Phvul.001G189100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44846054-44848053 Phaseolus vulgaris
Phvul.001G189100 5.0kb upstream 5.0kb upstream 6088 true Chr01: 44839966-44846053 Phaseolus vulgaris
Phvul.001G189100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44839966-44844965 Phaseolus vulgaris
Phvul.001G189100 5.0kb downstream 5.0kb downstream 6088 true Chr01: 44844966-44851053 Phaseolus vulgaris
Phvul.001G189100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44846054-44851053 Phaseolus vulgaris
Phvul.001G189100 10.0kb upstream 10.0kb upstream 11088 true Chr01: 44834966-44846053 Phaseolus vulgaris
Phvul.001G189100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44834966-44844965 Phaseolus vulgaris
Phvul.001G189100 10.0kb downstream 10.0kb downstream 11088 true Chr01: 44844966-44856053 Phaseolus vulgaris
Phvul.001G189100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44846054-44856053 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308811 5265 Fabidae View MSA
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.5771 0.0 97.1789 High  
cufflinks 44.9593 0.0 116.213 High  
cufflinks 23.6324 0.0 62.4156   Low
cufflinks 61.3631 0.0 160.28 High High
cufflinks 52.0481 0.0 134.944 High  
cufflinks 33.267 0.0 86.3274 High  
cufflinks 30.9882 0.0 80.3483 High  
cufflinks 33.9564 0.0 88.0428 High  
cufflinks 37.2288 0.0 96.2703 High  
cufflinks 39.0008 0.0 100.841 High  
cufflinks 66.5497 0.0 173.891 High High

0 Strain