Gene : Phvul.001G189900 P. vulgaris v2.1
Genomic Order:  1878 Name:  ? Phvul.001G189900
Secondary Identifier:  ? PAC:37169445
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G189900 0.5kb upstream 0.5kb upstream 3946 true Chr01: 44904139-44908084 Phaseolus vulgaris
Phvul.001G189900 0.5kb upstream 0.5kb upstream 500 false Chr01: 44904139-44904638 Phaseolus vulgaris
Phvul.001G189900 0.5kb downstream 0.5kb downstream 3946 true Chr01: 44904639-44908584 Phaseolus vulgaris
Phvul.001G189900 0.5kb downstream 0.5kb downstream 500 false Chr01: 44908085-44908584 Phaseolus vulgaris
Phvul.001G189900 1.0kb upstream 1.0kb upstream 4446 true Chr01: 44903639-44908084 Phaseolus vulgaris
Phvul.001G189900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44903639-44904638 Phaseolus vulgaris
Phvul.001G189900 1.0kb downstream 1.0kb downstream 4446 true Chr01: 44904639-44909084 Phaseolus vulgaris
Phvul.001G189900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44908085-44909084 Phaseolus vulgaris
Phvul.001G189900 2.0kb upstream 2.0kb upstream 5446 true Chr01: 44902639-44908084 Phaseolus vulgaris
Phvul.001G189900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44902639-44904638 Phaseolus vulgaris
Phvul.001G189900 2.0kb downstream 2.0kb downstream 5446 true Chr01: 44904639-44910084 Phaseolus vulgaris
Phvul.001G189900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44908085-44910084 Phaseolus vulgaris
Phvul.001G189900 5.0kb upstream 5.0kb upstream 8446 true Chr01: 44899639-44908084 Phaseolus vulgaris
Phvul.001G189900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44899639-44904638 Phaseolus vulgaris
Phvul.001G189900 5.0kb downstream 5.0kb downstream 8446 true Chr01: 44904639-44913084 Phaseolus vulgaris
Phvul.001G189900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44908085-44913084 Phaseolus vulgaris
Phvul.001G189900 10.0kb upstream 10.0kb upstream 13446 true Chr01: 44894639-44908084 Phaseolus vulgaris
Phvul.001G189900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44894639-44904638 Phaseolus vulgaris
Phvul.001G189900 10.0kb downstream 10.0kb downstream 13446 true Chr01: 44904639-44918084 Phaseolus vulgaris
Phvul.001G189900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44908085-44918084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312389 5265 Fabidae View MSA
124068213 5270 Rosid View MSA
123748215 5271 Pentapetalae View MSA
122795836 5272 Eudicot View MSA
122048634 5273 Angiosperm View MSA
121350255 5274 Embryophyte View MSA
123381647 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.35172 0.0 25.4585    
cufflinks 3.26215 0.0 22.6214    
cufflinks 22.2783 0.0 77.6938   High
cufflinks 3.59005 0.0 24.7591    
cufflinks 4.46542 0.0 28.1775    
cufflinks 14.6037 0.0 53.0838   High
cufflinks 0.0304319 0.0 1.95732 Low Low
cufflinks 0.202426 0.0 5.15836 Low Low
cufflinks 0.131612 0.0 4.10583 Low Low
cufflinks 0.797892 0.0 9.9217    
cufflinks 5.51921 0.0 33.8361    

0 Strain