Gene : Phvul.002G041700 P. vulgaris v2.1
Genomic Order:  417 Name:  ? Phvul.002G041700
Secondary Identifier:  ? PAC:37178643
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G041700 0.5kb upstream 0.5kb upstream 9789 true Chr02: 3953198-3962986 Phaseolus vulgaris
Phvul.002G041700 0.5kb upstream 0.5kb upstream 500 false Chr02: 3962487-3962986 Phaseolus vulgaris
Phvul.002G041700 0.5kb downstream 0.5kb downstream 9789 true Chr02: 3952698-3962486 Phaseolus vulgaris
Phvul.002G041700 0.5kb downstream 0.5kb downstream 500 false Chr02: 3952698-3953197 Phaseolus vulgaris
Phvul.002G041700 1.0kb upstream 1.0kb upstream 10289 true Chr02: 3953198-3963486 Phaseolus vulgaris
Phvul.002G041700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3962487-3963486 Phaseolus vulgaris
Phvul.002G041700 1.0kb downstream 1.0kb downstream 10289 true Chr02: 3952198-3962486 Phaseolus vulgaris
Phvul.002G041700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3952198-3953197 Phaseolus vulgaris
Phvul.002G041700 2.0kb upstream 2.0kb upstream 11289 true Chr02: 3953198-3964486 Phaseolus vulgaris
Phvul.002G041700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3962487-3964486 Phaseolus vulgaris
Phvul.002G041700 2.0kb downstream 2.0kb downstream 11289 true Chr02: 3951198-3962486 Phaseolus vulgaris
Phvul.002G041700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3951198-3953197 Phaseolus vulgaris
Phvul.002G041700 5.0kb upstream 5.0kb upstream 14289 true Chr02: 3953198-3967486 Phaseolus vulgaris
Phvul.002G041700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3962487-3967486 Phaseolus vulgaris
Phvul.002G041700 5.0kb downstream 5.0kb downstream 14289 true Chr02: 3948198-3962486 Phaseolus vulgaris
Phvul.002G041700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3948198-3953197 Phaseolus vulgaris
Phvul.002G041700 10.0kb upstream 10.0kb upstream 19289 true Chr02: 3953198-3972486 Phaseolus vulgaris
Phvul.002G041700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3962487-3972486 Phaseolus vulgaris
Phvul.002G041700 10.0kb downstream 10.0kb downstream 19289 true Chr02: 3943198-3962486 Phaseolus vulgaris
Phvul.002G041700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3943198-3953197 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310427 5265 Fabidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7037 0.0 10.9808   Low
cufflinks 9.80488 0.0 31.614    
cufflinks 17.8698 0.0 61.6597    
cufflinks 3.23769 0.0 9.9322   Low
cufflinks 8.44434 0.0 27.0375    
cufflinks 17.7894 0.0 78.282    
cufflinks 13.2062 0.0 55.8823    
cufflinks 16.2591 0.0 72.6457    
cufflinks 11.3517 0.0 51.1206    
cufflinks 23.7023 0.0 134.094   High
cufflinks 7.64649 0.0 36.7673    

0 Strain