Gene : Phvul.002G044200 P. vulgaris v2.1
Defline:  (1 of 3) K02984 - small subunit ribosomal protein S3Ae (RP-S3Ae, RPS3A) Genomic Order:  443
Name:  ? Phvul.002G044200 Secondary Identifier:  ? PAC:37174862
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G044200 0.5kb upstream 0.5kb upstream 2861 true Chr02: 4146866-4149726 Phaseolus vulgaris
Phvul.002G044200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4149227-4149726 Phaseolus vulgaris
Phvul.002G044200 0.5kb downstream 0.5kb downstream 2861 true Chr02: 4146366-4149226 Phaseolus vulgaris
Phvul.002G044200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4146366-4146865 Phaseolus vulgaris
Phvul.002G044200 1.0kb upstream 1.0kb upstream 3361 true Chr02: 4146866-4150226 Phaseolus vulgaris
Phvul.002G044200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4149227-4150226 Phaseolus vulgaris
Phvul.002G044200 1.0kb downstream 1.0kb downstream 3361 true Chr02: 4145866-4149226 Phaseolus vulgaris
Phvul.002G044200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4145866-4146865 Phaseolus vulgaris
Phvul.002G044200 2.0kb upstream 2.0kb upstream 4361 true Chr02: 4146866-4151226 Phaseolus vulgaris
Phvul.002G044200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4149227-4151226 Phaseolus vulgaris
Phvul.002G044200 2.0kb downstream 2.0kb downstream 4361 true Chr02: 4144866-4149226 Phaseolus vulgaris
Phvul.002G044200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4144866-4146865 Phaseolus vulgaris
Phvul.002G044200 5.0kb upstream 5.0kb upstream 7361 true Chr02: 4146866-4154226 Phaseolus vulgaris
Phvul.002G044200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4149227-4154226 Phaseolus vulgaris
Phvul.002G044200 5.0kb downstream 5.0kb downstream 7361 true Chr02: 4141866-4149226 Phaseolus vulgaris
Phvul.002G044200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4141866-4146865 Phaseolus vulgaris
Phvul.002G044200 10.0kb upstream 10.0kb upstream 12361 true Chr02: 4146866-4159226 Phaseolus vulgaris
Phvul.002G044200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4149227-4159226 Phaseolus vulgaris
Phvul.002G044200 10.0kb downstream 10.0kb downstream 12361 true Chr02: 4136866-4149226 Phaseolus vulgaris
Phvul.002G044200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4136866-4146865 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307732 5265 Fabidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 217.682 0.0 634.084 High  
cufflinks 306.617 0.0 943.324 High High
cufflinks 171.342 0.0 487.277 High  
cufflinks 296.92 0.0 905.911 High High
cufflinks 217.571 0.0 631.143 High  
cufflinks 144.432 0.0 402.474 High Low
cufflinks 192.579 0.0 555.826 High  
cufflinks 221.807 0.0 651.438 High  
cufflinks 258.323 0.0 777.877 High  
cufflinks 112.571 0.0 304.757 High Low
cufflinks 245.109 0.0 726.579 High  

0 Strain