Gene : Phvul.002G033800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF132 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  337
Name:  ? Phvul.002G033800 Secondary Identifier:  ? PAC:37175796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G033800 0.5kb upstream 0.5kb upstream 1472 true Chr02: 3381674-3383145 Phaseolus vulgaris
Phvul.002G033800 0.5kb upstream 0.5kb upstream 500 false Chr02: 3381674-3382173 Phaseolus vulgaris
Phvul.002G033800 0.5kb downstream 0.5kb downstream 1472 true Chr02: 3382174-3383645 Phaseolus vulgaris
Phvul.002G033800 0.5kb downstream 0.5kb downstream 500 false Chr02: 3383146-3383645 Phaseolus vulgaris
Phvul.002G033800 1.0kb upstream 1.0kb upstream 1972 true Chr02: 3381174-3383145 Phaseolus vulgaris
Phvul.002G033800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3381174-3382173 Phaseolus vulgaris
Phvul.002G033800 1.0kb downstream 1.0kb downstream 1972 true Chr02: 3382174-3384145 Phaseolus vulgaris
Phvul.002G033800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3383146-3384145 Phaseolus vulgaris
Phvul.002G033800 2.0kb upstream 2.0kb upstream 2972 true Chr02: 3380174-3383145 Phaseolus vulgaris
Phvul.002G033800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3380174-3382173 Phaseolus vulgaris
Phvul.002G033800 2.0kb downstream 2.0kb downstream 2972 true Chr02: 3382174-3385145 Phaseolus vulgaris
Phvul.002G033800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3383146-3385145 Phaseolus vulgaris
Phvul.002G033800 5.0kb upstream 5.0kb upstream 5972 true Chr02: 3377174-3383145 Phaseolus vulgaris
Phvul.002G033800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3377174-3382173 Phaseolus vulgaris
Phvul.002G033800 5.0kb downstream 5.0kb downstream 5972 true Chr02: 3382174-3388145 Phaseolus vulgaris
Phvul.002G033800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3383146-3388145 Phaseolus vulgaris
Phvul.002G033800 10.0kb upstream 10.0kb upstream 10972 true Chr02: 3372174-3383145 Phaseolus vulgaris
Phvul.002G033800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3372174-3382173 Phaseolus vulgaris
Phvul.002G033800 10.0kb downstream 10.0kb downstream 10972 true Chr02: 3382174-3393145 Phaseolus vulgaris
Phvul.002G033800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3383146-3393145 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299838 5265 Fabidae View MSA
124070077 5270 Rosid View MSA
123749525 5271 Pentapetalae View MSA
122797492 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126806 0.0 0.565423 Low  
cufflinks 0.231844 0.0 0.977015 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0700783 0.0 0.34746 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.69479 0.0 7.24941   High
cufflinks 1.04398 0.0 6.88573    
cufflinks 1.18283 0.0 7.14902   High
cufflinks 0.157032 0.0 0.698742 Low  
cufflinks 0.0863014 0.0 0.420071 Low  

0 Strain