Gene : Phvul.002G033600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  335
Name:  ? Phvul.002G033600 Secondary Identifier:  ? PAC:37176300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G033600 0.5kb upstream 0.5kb upstream 4374 true Chr02: 3369862-3374235 Phaseolus vulgaris
Phvul.002G033600 0.5kb upstream 0.5kb upstream 500 false Chr02: 3373736-3374235 Phaseolus vulgaris
Phvul.002G033600 0.5kb downstream 0.5kb downstream 4374 true Chr02: 3369362-3373735 Phaseolus vulgaris
Phvul.002G033600 0.5kb downstream 0.5kb downstream 500 false Chr02: 3369362-3369861 Phaseolus vulgaris
Phvul.002G033600 1.0kb upstream 1.0kb upstream 4874 true Chr02: 3369862-3374735 Phaseolus vulgaris
Phvul.002G033600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3373736-3374735 Phaseolus vulgaris
Phvul.002G033600 1.0kb downstream 1.0kb downstream 4874 true Chr02: 3368862-3373735 Phaseolus vulgaris
Phvul.002G033600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3368862-3369861 Phaseolus vulgaris
Phvul.002G033600 2.0kb upstream 2.0kb upstream 5874 true Chr02: 3369862-3375735 Phaseolus vulgaris
Phvul.002G033600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3373736-3375735 Phaseolus vulgaris
Phvul.002G033600 2.0kb downstream 2.0kb downstream 5874 true Chr02: 3367862-3373735 Phaseolus vulgaris
Phvul.002G033600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3367862-3369861 Phaseolus vulgaris
Phvul.002G033600 5.0kb upstream 5.0kb upstream 8874 true Chr02: 3369862-3378735 Phaseolus vulgaris
Phvul.002G033600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3373736-3378735 Phaseolus vulgaris
Phvul.002G033600 5.0kb downstream 5.0kb downstream 8874 true Chr02: 3364862-3373735 Phaseolus vulgaris
Phvul.002G033600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3364862-3369861 Phaseolus vulgaris
Phvul.002G033600 10.0kb upstream 10.0kb upstream 13874 true Chr02: 3369862-3383735 Phaseolus vulgaris
Phvul.002G033600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3373736-3383735 Phaseolus vulgaris
Phvul.002G033600 10.0kb downstream 10.0kb downstream 13874 true Chr02: 3359862-3373735 Phaseolus vulgaris
Phvul.002G033600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3359862-3369861 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308854 5265 Fabidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1798 0.0 56.9239   High
cufflinks 7.01126 0.0 21.0687    
cufflinks 29.7018 0.0 77.9162   High
cufflinks 15.0082 0.0 41.8285    
cufflinks 5.38462 0.0 16.6914    
cufflinks 12.985 0.0 36.4951    
cufflinks 4.51597 0.0 14.3055    
cufflinks 5.10689 0.0 15.9058    
cufflinks 6.12596 0.0 18.8234    
cufflinks 5.35123 0.0 16.5705    
cufflinks 3.90087 0.0 12.5762   Low

0 Strain