Gene : Phvul.002G034500 P. vulgaris v2.1
Defline:  (1 of 2) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase Genomic Order:  344
Name:  ? Phvul.002G034500 Secondary Identifier:  ? PAC:37178220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5188 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5918 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G034500 0.5kb upstream 0.5kb upstream 3387 true Chr02: 3438863-3442249 Phaseolus vulgaris
Phvul.002G034500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3438863-3439362 Phaseolus vulgaris
Phvul.002G034500 0.5kb downstream 0.5kb downstream 3387 true Chr02: 3439363-3442749 Phaseolus vulgaris
Phvul.002G034500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3442250-3442749 Phaseolus vulgaris
Phvul.002G034500 1.0kb upstream 1.0kb upstream 3887 true Chr02: 3438363-3442249 Phaseolus vulgaris
Phvul.002G034500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3438363-3439362 Phaseolus vulgaris
Phvul.002G034500 1.0kb downstream 1.0kb downstream 3887 true Chr02: 3439363-3443249 Phaseolus vulgaris
Phvul.002G034500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3442250-3443249 Phaseolus vulgaris
Phvul.002G034500 2.0kb upstream 2.0kb upstream 4887 true Chr02: 3437363-3442249 Phaseolus vulgaris
Phvul.002G034500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3437363-3439362 Phaseolus vulgaris
Phvul.002G034500 2.0kb downstream 2.0kb downstream 4887 true Chr02: 3439363-3444249 Phaseolus vulgaris
Phvul.002G034500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3442250-3444249 Phaseolus vulgaris
Phvul.002G034500 5.0kb upstream 5.0kb upstream 7887 true Chr02: 3434363-3442249 Phaseolus vulgaris
Phvul.002G034500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3434363-3439362 Phaseolus vulgaris
Phvul.002G034500 5.0kb downstream 5.0kb downstream 7887 true Chr02: 3439363-3447249 Phaseolus vulgaris
Phvul.002G034500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3442250-3447249 Phaseolus vulgaris
Phvul.002G034500 10.0kb upstream 10.0kb upstream 12887 true Chr02: 3429363-3442249 Phaseolus vulgaris
Phvul.002G034500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3429363-3439362 Phaseolus vulgaris
Phvul.002G034500 10.0kb downstream 10.0kb downstream 12887 true Chr02: 3439363-3452249 Phaseolus vulgaris
Phvul.002G034500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3442250-3452249 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310703 5265 Fabidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.2314 0.0 209.431 High  
cufflinks 85.6199 0.0 230.271 High  
cufflinks 124.827 0.0 348.807 High High
cufflinks 69.8113 0.0 184.814 High  
cufflinks 35.634 0.0 92.1079 High  
cufflinks 133.927 0.0 376.236 High High
cufflinks 10.8586 0.0 29.6819   Low
cufflinks 18.0568 0.0 47.4868    
cufflinks 12.0735 0.0 32.7622   Low
cufflinks 29.5832 0.0 76.5407    
cufflinks 25.6748 0.0 66.6491    

0 Strain