Gene : Phvul.002G033500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Genomic Order:  334
Name:  ? Phvul.002G033500 Secondary Identifier:  ? PAC:37175779
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G033500 0.5kb upstream 0.5kb upstream 2882 true Chr02: 3366596-3369477 Phaseolus vulgaris
Phvul.002G033500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3366596-3367095 Phaseolus vulgaris
Phvul.002G033500 0.5kb downstream 0.5kb downstream 2882 true Chr02: 3367096-3369977 Phaseolus vulgaris
Phvul.002G033500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3369478-3369977 Phaseolus vulgaris
Phvul.002G033500 1.0kb upstream 1.0kb upstream 3382 true Chr02: 3366096-3369477 Phaseolus vulgaris
Phvul.002G033500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3366096-3367095 Phaseolus vulgaris
Phvul.002G033500 1.0kb downstream 1.0kb downstream 3382 true Chr02: 3367096-3370477 Phaseolus vulgaris
Phvul.002G033500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3369478-3370477 Phaseolus vulgaris
Phvul.002G033500 2.0kb upstream 2.0kb upstream 4382 true Chr02: 3365096-3369477 Phaseolus vulgaris
Phvul.002G033500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3365096-3367095 Phaseolus vulgaris
Phvul.002G033500 2.0kb downstream 2.0kb downstream 4382 true Chr02: 3367096-3371477 Phaseolus vulgaris
Phvul.002G033500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3369478-3371477 Phaseolus vulgaris
Phvul.002G033500 5.0kb upstream 5.0kb upstream 7382 true Chr02: 3362096-3369477 Phaseolus vulgaris
Phvul.002G033500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3362096-3367095 Phaseolus vulgaris
Phvul.002G033500 5.0kb downstream 5.0kb downstream 7382 true Chr02: 3367096-3374477 Phaseolus vulgaris
Phvul.002G033500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3369478-3374477 Phaseolus vulgaris
Phvul.002G033500 10.0kb upstream 10.0kb upstream 12382 true Chr02: 3357096-3369477 Phaseolus vulgaris
Phvul.002G033500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3357096-3367095 Phaseolus vulgaris
Phvul.002G033500 10.0kb downstream 10.0kb downstream 12382 true Chr02: 3367096-3379477 Phaseolus vulgaris
Phvul.002G033500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3369478-3379477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299710 5265 Fabidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95511 0.0 8.77687   Low
cufflinks 20.8586 0.0 53.9172   High
cufflinks 8.48506 0.0 22.8469    
cufflinks 9.34757 0.0 24.9738    
cufflinks 9.23406 0.0 24.7472    
cufflinks 8.69751 0.0 23.3108    
cufflinks 7.10601 0.0 19.3122    
cufflinks 3.80227 0.0 10.9626    
cufflinks 2.98745 0.0 8.84621   Low
cufflinks 2.38154 0.0 7.27005   Low
cufflinks 16.3786 0.0 42.4892   High

0 Strain