Gene : Phvul.002G035200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21496:SF0 - RIESKE DOMAIN-CONTAINING PROTEIN Genomic Order:  351
Name:  ? Phvul.002G035200 Secondary Identifier:  ? PAC:37176592
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G035200 0.5kb upstream 0.5kb upstream 5011 true Chr02: 3479465-3484475 Phaseolus vulgaris
Phvul.002G035200 0.5kb upstream 0.5kb upstream 500 false Chr02: 3483976-3484475 Phaseolus vulgaris
Phvul.002G035200 0.5kb downstream 0.5kb downstream 5011 true Chr02: 3478965-3483975 Phaseolus vulgaris
Phvul.002G035200 0.5kb downstream 0.5kb downstream 500 false Chr02: 3478965-3479464 Phaseolus vulgaris
Phvul.002G035200 1.0kb upstream 1.0kb upstream 5511 true Chr02: 3479465-3484975 Phaseolus vulgaris
Phvul.002G035200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3483976-3484975 Phaseolus vulgaris
Phvul.002G035200 1.0kb downstream 1.0kb downstream 5511 true Chr02: 3478465-3483975 Phaseolus vulgaris
Phvul.002G035200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3478465-3479464 Phaseolus vulgaris
Phvul.002G035200 2.0kb upstream 2.0kb upstream 6511 true Chr02: 3479465-3485975 Phaseolus vulgaris
Phvul.002G035200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3483976-3485975 Phaseolus vulgaris
Phvul.002G035200 2.0kb downstream 2.0kb downstream 6511 true Chr02: 3477465-3483975 Phaseolus vulgaris
Phvul.002G035200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3477465-3479464 Phaseolus vulgaris
Phvul.002G035200 5.0kb upstream 5.0kb upstream 9511 true Chr02: 3479465-3488975 Phaseolus vulgaris
Phvul.002G035200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3483976-3488975 Phaseolus vulgaris
Phvul.002G035200 5.0kb downstream 5.0kb downstream 9511 true Chr02: 3474465-3483975 Phaseolus vulgaris
Phvul.002G035200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3474465-3479464 Phaseolus vulgaris
Phvul.002G035200 10.0kb upstream 10.0kb upstream 14511 true Chr02: 3479465-3493975 Phaseolus vulgaris
Phvul.002G035200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3483976-3493975 Phaseolus vulgaris
Phvul.002G035200 10.0kb downstream 10.0kb downstream 14511 true Chr02: 3469465-3483975 Phaseolus vulgaris
Phvul.002G035200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3469465-3479464 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307364 5265 Fabidae View MSA
124067812 5270 Rosid View MSA
123738618 5271 Pentapetalae View MSA
122790804 5272 Eudicot View MSA
122047162 5273 Angiosperm View MSA
121343793 5274 Embryophyte View MSA
123424201 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.9348 0.0 120.975 High  
cufflinks 29.0488 0.0 93.224    
cufflinks 255.103 0.0 1003.46 High High
cufflinks 29.8431 0.0 93.9474    
cufflinks 30.1168 0.0 94.8056    
cufflinks 99.8205 0.0 317.544 High High
cufflinks 2.32377 0.0 11.1082   Low
cufflinks 1.87246 0.0 7.67518   Low
cufflinks 3.16264 0.0 11.2283   Low
cufflinks 24.4949 0.0 78.0401    
cufflinks 22.6075 0.0 75.1397    

0 Strain