Gene : Phvul.002G036000 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  359
Name:  ? Phvul.002G036000 Secondary Identifier:  ? PAC:37177041
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G036000 0.5kb upstream 0.5kb upstream 1216 true Chr02: 3538136-3539351 Phaseolus vulgaris
Phvul.002G036000 0.5kb upstream 0.5kb upstream 500 false Chr02: 3538136-3538635 Phaseolus vulgaris
Phvul.002G036000 0.5kb downstream 0.5kb downstream 1216 true Chr02: 3538636-3539851 Phaseolus vulgaris
Phvul.002G036000 0.5kb downstream 0.5kb downstream 500 false Chr02: 3539352-3539851 Phaseolus vulgaris
Phvul.002G036000 1.0kb upstream 1.0kb upstream 1716 true Chr02: 3537636-3539351 Phaseolus vulgaris
Phvul.002G036000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3537636-3538635 Phaseolus vulgaris
Phvul.002G036000 1.0kb downstream 1.0kb downstream 1716 true Chr02: 3538636-3540351 Phaseolus vulgaris
Phvul.002G036000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3539352-3540351 Phaseolus vulgaris
Phvul.002G036000 2.0kb upstream 2.0kb upstream 2716 true Chr02: 3536636-3539351 Phaseolus vulgaris
Phvul.002G036000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3536636-3538635 Phaseolus vulgaris
Phvul.002G036000 2.0kb downstream 2.0kb downstream 2716 true Chr02: 3538636-3541351 Phaseolus vulgaris
Phvul.002G036000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3539352-3541351 Phaseolus vulgaris
Phvul.002G036000 5.0kb upstream 5.0kb upstream 5716 true Chr02: 3533636-3539351 Phaseolus vulgaris
Phvul.002G036000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3533636-3538635 Phaseolus vulgaris
Phvul.002G036000 5.0kb downstream 5.0kb downstream 5716 true Chr02: 3538636-3544351 Phaseolus vulgaris
Phvul.002G036000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3539352-3544351 Phaseolus vulgaris
Phvul.002G036000 10.0kb upstream 10.0kb upstream 10716 true Chr02: 3528636-3539351 Phaseolus vulgaris
Phvul.002G036000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3528636-3538635 Phaseolus vulgaris
Phvul.002G036000 10.0kb downstream 10.0kb downstream 10716 true Chr02: 3538636-3549351 Phaseolus vulgaris
Phvul.002G036000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3539352-3549351 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312584 5265 Fabidae View MSA
124073354 5270 Rosid View MSA
123741897 5271 Pentapetalae View MSA
122793297 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.686218 0.0 2.66163    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.256911 0.0 1.07869 Low  
cufflinks 0.167441 0.0 0.726101 Low  
cufflinks 0.0812141 0.0 0.381345 Low Low
cufflinks 0.0626408 0.0 0.302023 Low Low
cufflinks 2.49787 0.0 8.54997   High
cufflinks 0.983223 0.0 3.6851   High
cufflinks 0.370617 0.0 1.49581 Low  
cufflinks 0.275413 0.0 1.14734 Low  
cufflinks 0.139475 0.0 0.617077 Low  

0 Strain