Gene : Phvul.002G021400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31003//PTHR31003:SF2 - MYB FAMILY TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  212
Name:  ? Phvul.002G021400 Secondary Identifier:  ? PAC:37177706
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G021400 0.5kb upstream 0.5kb upstream 2693 true Chr02: 2281528-2284220 Phaseolus vulgaris
Phvul.002G021400 0.5kb upstream 0.5kb upstream 500 false Chr02: 2283721-2284220 Phaseolus vulgaris
Phvul.002G021400 0.5kb downstream 0.5kb downstream 2693 true Chr02: 2281028-2283720 Phaseolus vulgaris
Phvul.002G021400 0.5kb downstream 0.5kb downstream 500 false Chr02: 2281028-2281527 Phaseolus vulgaris
Phvul.002G021400 1.0kb upstream 1.0kb upstream 3193 true Chr02: 2281528-2284720 Phaseolus vulgaris
Phvul.002G021400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2283721-2284720 Phaseolus vulgaris
Phvul.002G021400 1.0kb downstream 1.0kb downstream 3193 true Chr02: 2280528-2283720 Phaseolus vulgaris
Phvul.002G021400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2280528-2281527 Phaseolus vulgaris
Phvul.002G021400 2.0kb upstream 2.0kb upstream 4193 true Chr02: 2281528-2285720 Phaseolus vulgaris
Phvul.002G021400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2283721-2285720 Phaseolus vulgaris
Phvul.002G021400 2.0kb downstream 2.0kb downstream 4193 true Chr02: 2279528-2283720 Phaseolus vulgaris
Phvul.002G021400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2279528-2281527 Phaseolus vulgaris
Phvul.002G021400 5.0kb upstream 5.0kb upstream 7193 true Chr02: 2281528-2288720 Phaseolus vulgaris
Phvul.002G021400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2283721-2288720 Phaseolus vulgaris
Phvul.002G021400 5.0kb downstream 5.0kb downstream 7193 true Chr02: 2276528-2283720 Phaseolus vulgaris
Phvul.002G021400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2276528-2281527 Phaseolus vulgaris
Phvul.002G021400 10.0kb upstream 10.0kb upstream 12193 true Chr02: 2281528-2293720 Phaseolus vulgaris
Phvul.002G021400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2283721-2293720 Phaseolus vulgaris
Phvul.002G021400 10.0kb downstream 10.0kb downstream 12193 true Chr02: 2271528-2283720 Phaseolus vulgaris
Phvul.002G021400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2271528-2281527 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312255 5265 Fabidae View MSA
124066907 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17402 0.0 6.80931    
cufflinks 4.50025 0.0 12.9468    
cufflinks 3.74914 0.0 11.0084    
cufflinks 5.51395 0.0 15.593    
cufflinks 7.34241 0.0 20.2252   High
cufflinks 0.513718 0.0 1.87358 Low Low
cufflinks 0.764431 0.0 2.66685    
cufflinks 0.588903 0.0 2.11645   Low
cufflinks 1.44498 0.0 4.69634    
cufflinks 17.8801 0.0 46.4211   High
cufflinks 1.06881 0.0 3.61807    

0 Strain