Gene : Phvul.002G024000 P. vulgaris v2.1
Defline:  (1 of 2) K02716 - photosystem II oxygen-evolving enhancer protein 1 (psbO) Genomic Order:  238
Name:  ? Phvul.002G024000 Secondary Identifier:  ? PAC:37178775
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G024000 0.5kb upstream 0.5kb upstream 2111 true Chr02: 2481919-2484029 Phaseolus vulgaris
Phvul.002G024000 0.5kb upstream 0.5kb upstream 500 false Chr02: 2481919-2482418 Phaseolus vulgaris
Phvul.002G024000 0.5kb downstream 0.5kb downstream 2111 true Chr02: 2482419-2484529 Phaseolus vulgaris
Phvul.002G024000 0.5kb downstream 0.5kb downstream 500 false Chr02: 2484030-2484529 Phaseolus vulgaris
Phvul.002G024000 1.0kb upstream 1.0kb upstream 2611 true Chr02: 2481419-2484029 Phaseolus vulgaris
Phvul.002G024000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2481419-2482418 Phaseolus vulgaris
Phvul.002G024000 1.0kb downstream 1.0kb downstream 2611 true Chr02: 2482419-2485029 Phaseolus vulgaris
Phvul.002G024000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2484030-2485029 Phaseolus vulgaris
Phvul.002G024000 2.0kb upstream 2.0kb upstream 3611 true Chr02: 2480419-2484029 Phaseolus vulgaris
Phvul.002G024000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2480419-2482418 Phaseolus vulgaris
Phvul.002G024000 2.0kb downstream 2.0kb downstream 3611 true Chr02: 2482419-2486029 Phaseolus vulgaris
Phvul.002G024000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2484030-2486029 Phaseolus vulgaris
Phvul.002G024000 5.0kb upstream 5.0kb upstream 6611 true Chr02: 2477419-2484029 Phaseolus vulgaris
Phvul.002G024000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2477419-2482418 Phaseolus vulgaris
Phvul.002G024000 5.0kb downstream 5.0kb downstream 6611 true Chr02: 2482419-2489029 Phaseolus vulgaris
Phvul.002G024000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2484030-2489029 Phaseolus vulgaris
Phvul.002G024000 10.0kb upstream 10.0kb upstream 11611 true Chr02: 2472419-2484029 Phaseolus vulgaris
Phvul.002G024000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2472419-2482418 Phaseolus vulgaris
Phvul.002G024000 10.0kb downstream 10.0kb downstream 11611 true Chr02: 2482419-2494029 Phaseolus vulgaris
Phvul.002G024000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2484030-2494029 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310095 5265 Fabidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.572 0.0 289.126 High  
cufflinks 183.626 0.0 551.192 High  
cufflinks 2550.21 0.0 14549.0 High High
cufflinks 133.996 0.0 387.135 High  
cufflinks 249.269 0.0 787.56 High  
cufflinks 603.216 0.0 2317.23 High  
cufflinks 1.73121 0.0 5.60853   Low
cufflinks 0.796311 0.0 2.83126   Low
cufflinks 1.54178 0.0 5.06037   Low
cufflinks 223.933 0.0 691.585 High  
cufflinks 157.031 0.0 462.031 High  

0 Strain