Gene : Phvul.002G027200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Genomic Order:  270
Name:  ? Phvul.002G027200 Secondary Identifier:  ? PAC:37176517
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G027200 0.5kb upstream 0.5kb upstream 2725 true Chr02: 2849771-2852495 Phaseolus vulgaris
Phvul.002G027200 0.5kb upstream 0.5kb upstream 500 false Chr02: 2849771-2850270 Phaseolus vulgaris
Phvul.002G027200 0.5kb downstream 0.5kb downstream 2725 true Chr02: 2850271-2852995 Phaseolus vulgaris
Phvul.002G027200 0.5kb downstream 0.5kb downstream 500 false Chr02: 2852496-2852995 Phaseolus vulgaris
Phvul.002G027200 1.0kb upstream 1.0kb upstream 3225 true Chr02: 2849271-2852495 Phaseolus vulgaris
Phvul.002G027200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2849271-2850270 Phaseolus vulgaris
Phvul.002G027200 1.0kb downstream 1.0kb downstream 3225 true Chr02: 2850271-2853495 Phaseolus vulgaris
Phvul.002G027200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2852496-2853495 Phaseolus vulgaris
Phvul.002G027200 2.0kb upstream 2.0kb upstream 4225 true Chr02: 2848271-2852495 Phaseolus vulgaris
Phvul.002G027200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2848271-2850270 Phaseolus vulgaris
Phvul.002G027200 2.0kb downstream 2.0kb downstream 4225 true Chr02: 2850271-2854495 Phaseolus vulgaris
Phvul.002G027200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2852496-2854495 Phaseolus vulgaris
Phvul.002G027200 5.0kb upstream 5.0kb upstream 7225 true Chr02: 2845271-2852495 Phaseolus vulgaris
Phvul.002G027200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2845271-2850270 Phaseolus vulgaris
Phvul.002G027200 5.0kb downstream 5.0kb downstream 7225 true Chr02: 2850271-2857495 Phaseolus vulgaris
Phvul.002G027200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2852496-2857495 Phaseolus vulgaris
Phvul.002G027200 10.0kb upstream 10.0kb upstream 12225 true Chr02: 2840271-2852495 Phaseolus vulgaris
Phvul.002G027200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2840271-2850270 Phaseolus vulgaris
Phvul.002G027200 10.0kb downstream 10.0kb downstream 12225 true Chr02: 2850271-2862495 Phaseolus vulgaris
Phvul.002G027200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2852496-2862495 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308110 5265 Fabidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6645 0.0 73.2701   High
cufflinks 71.4712 0.0 204.523 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.73879 0.0 15.1901    
cufflinks 0.104977 0.0 0.466744 Low Low
cufflinks 0.343969 0.0 1.35555 Low Low
cufflinks 5.3304 0.0 19.8669    
cufflinks 1.09879 0.0 4.83443    
cufflinks 5.75703 0.0 21.1185    
cufflinks 3.21099 0.0 11.0238    
cufflinks 4.34589 0.0 14.1296    

0 Strain