Gene : Phvul.002G011700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24413:SF129 - BTB AND MATH DOMAIN-CONTAINING PROTEIN 42 Genomic Order:  114
Name:  ? Phvul.002G011700 Secondary Identifier:  ? PAC:37176682
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G011700 0.5kb upstream 0.5kb upstream 3797 true Chr02: 1252096-1255892 Phaseolus vulgaris
Phvul.002G011700 0.5kb upstream 0.5kb upstream 500 false Chr02: 1252096-1252595 Phaseolus vulgaris
Phvul.002G011700 0.5kb downstream 0.5kb downstream 3797 true Chr02: 1252596-1256392 Phaseolus vulgaris
Phvul.002G011700 0.5kb downstream 0.5kb downstream 500 false Chr02: 1255893-1256392 Phaseolus vulgaris
Phvul.002G011700 1.0kb upstream 1.0kb upstream 4297 true Chr02: 1251596-1255892 Phaseolus vulgaris
Phvul.002G011700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1251596-1252595 Phaseolus vulgaris
Phvul.002G011700 1.0kb downstream 1.0kb downstream 4297 true Chr02: 1252596-1256892 Phaseolus vulgaris
Phvul.002G011700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1255893-1256892 Phaseolus vulgaris
Phvul.002G011700 2.0kb upstream 2.0kb upstream 5297 true Chr02: 1250596-1255892 Phaseolus vulgaris
Phvul.002G011700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1250596-1252595 Phaseolus vulgaris
Phvul.002G011700 2.0kb downstream 2.0kb downstream 5297 true Chr02: 1252596-1257892 Phaseolus vulgaris
Phvul.002G011700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1255893-1257892 Phaseolus vulgaris
Phvul.002G011700 5.0kb upstream 5.0kb upstream 8297 true Chr02: 1247596-1255892 Phaseolus vulgaris
Phvul.002G011700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1247596-1252595 Phaseolus vulgaris
Phvul.002G011700 5.0kb downstream 5.0kb downstream 8297 true Chr02: 1252596-1260892 Phaseolus vulgaris
Phvul.002G011700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1255893-1260892 Phaseolus vulgaris
Phvul.002G011700 10.0kb upstream 10.0kb upstream 13297 true Chr02: 1242596-1255892 Phaseolus vulgaris
Phvul.002G011700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1242596-1252595 Phaseolus vulgaris
Phvul.002G011700 10.0kb downstream 10.0kb downstream 13297 true Chr02: 1252596-1265892 Phaseolus vulgaris
Phvul.002G011700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1255893-1265892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302008 5265 Fabidae View MSA
124060876 5270 Rosid View MSA
123744257 5271 Pentapetalae View MSA
122792458 5272 Eudicot View MSA
122047166 5273 Angiosperm View MSA
121348143 5274 Embryophyte View MSA
123380742 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.14703 0.0 23.1987   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.078759 0.0 0.39199 Low  
cufflinks 1.54866 0.0 9.30288    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0250745 0.0 0.177128 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain