Gene : Phvul.002G012100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Genomic Order:  118
Name:  ? Phvul.002G012100 Secondary Identifier:  ? PAC:37176330
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G012100 0.5kb upstream 0.5kb upstream 3603 true Chr02: 1332446-1336048 Phaseolus vulgaris
Phvul.002G012100 0.5kb upstream 0.5kb upstream 500 false Chr02: 1332446-1332945 Phaseolus vulgaris
Phvul.002G012100 0.5kb downstream 0.5kb downstream 3603 true Chr02: 1332946-1336548 Phaseolus vulgaris
Phvul.002G012100 0.5kb downstream 0.5kb downstream 500 false Chr02: 1336049-1336548 Phaseolus vulgaris
Phvul.002G012100 1.0kb upstream 1.0kb upstream 4103 true Chr02: 1331946-1336048 Phaseolus vulgaris
Phvul.002G012100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1331946-1332945 Phaseolus vulgaris
Phvul.002G012100 1.0kb downstream 1.0kb downstream 4103 true Chr02: 1332946-1337048 Phaseolus vulgaris
Phvul.002G012100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1336049-1337048 Phaseolus vulgaris
Phvul.002G012100 2.0kb upstream 2.0kb upstream 5103 true Chr02: 1330946-1336048 Phaseolus vulgaris
Phvul.002G012100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1330946-1332945 Phaseolus vulgaris
Phvul.002G012100 2.0kb downstream 2.0kb downstream 5103 true Chr02: 1332946-1338048 Phaseolus vulgaris
Phvul.002G012100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1336049-1338048 Phaseolus vulgaris
Phvul.002G012100 5.0kb upstream 5.0kb upstream 8103 true Chr02: 1327946-1336048 Phaseolus vulgaris
Phvul.002G012100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1327946-1332945 Phaseolus vulgaris
Phvul.002G012100 5.0kb downstream 5.0kb downstream 8103 true Chr02: 1332946-1341048 Phaseolus vulgaris
Phvul.002G012100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1336049-1341048 Phaseolus vulgaris
Phvul.002G012100 10.0kb upstream 10.0kb upstream 13103 true Chr02: 1322946-1336048 Phaseolus vulgaris
Phvul.002G012100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1322946-1332945 Phaseolus vulgaris
Phvul.002G012100 10.0kb downstream 10.0kb downstream 13103 true Chr02: 1332946-1346048 Phaseolus vulgaris
Phvul.002G012100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1336049-1346048 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312059 5265 Fabidae View MSA
124070821 5270 Rosid View MSA
123742373 5271 Pentapetalae View MSA
122795462 5272 Eudicot View MSA
122048860 5273 Angiosperm View MSA
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0245 0.0 32.3748    
cufflinks 12.0836 0.0 32.536    
cufflinks 19.6223 0.0 51.2336   High
cufflinks 11.665 0.0 31.5832    
cufflinks 7.6559 0.0 21.5071    
cufflinks 11.0886 0.0 30.0458    
cufflinks 4.15718 0.0 12.3833   Low
cufflinks 4.68203 0.0 13.7604    
cufflinks 4.13878 0.0 12.3717   Low
cufflinks 4.90662 0.0 14.398    
cufflinks 7.0773 0.0 19.9979    

0 Strain