Gene : Phvul.002G017900 P. vulgaris v2.1
Defline:  (1 of 1) K02320 - DNA polymerase alpha subunit A (POLA1) Genomic Order:  177
Name:  ? Phvul.002G017900 Secondary Identifier:  ? PAC:37175042
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G017900 0.5kb upstream 0.5kb upstream 12192 true Chr02: 1921585-1933776 Phaseolus vulgaris
Phvul.002G017900 0.5kb upstream 0.5kb upstream 500 false Chr02: 1933277-1933776 Phaseolus vulgaris
Phvul.002G017900 0.5kb downstream 0.5kb downstream 12192 true Chr02: 1921085-1933276 Phaseolus vulgaris
Phvul.002G017900 0.5kb downstream 0.5kb downstream 500 false Chr02: 1921085-1921584 Phaseolus vulgaris
Phvul.002G017900 1.0kb upstream 1.0kb upstream 12692 true Chr02: 1921585-1934276 Phaseolus vulgaris
Phvul.002G017900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1933277-1934276 Phaseolus vulgaris
Phvul.002G017900 1.0kb downstream 1.0kb downstream 12692 true Chr02: 1920585-1933276 Phaseolus vulgaris
Phvul.002G017900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1920585-1921584 Phaseolus vulgaris
Phvul.002G017900 2.0kb upstream 2.0kb upstream 13692 true Chr02: 1921585-1935276 Phaseolus vulgaris
Phvul.002G017900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1933277-1935276 Phaseolus vulgaris
Phvul.002G017900 2.0kb downstream 2.0kb downstream 13692 true Chr02: 1919585-1933276 Phaseolus vulgaris
Phvul.002G017900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1919585-1921584 Phaseolus vulgaris
Phvul.002G017900 5.0kb upstream 5.0kb upstream 16692 true Chr02: 1921585-1938276 Phaseolus vulgaris
Phvul.002G017900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1933277-1938276 Phaseolus vulgaris
Phvul.002G017900 5.0kb downstream 5.0kb downstream 16692 true Chr02: 1916585-1933276 Phaseolus vulgaris
Phvul.002G017900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1916585-1921584 Phaseolus vulgaris
Phvul.002G017900 10.0kb upstream 10.0kb upstream 21692 true Chr02: 1921585-1943276 Phaseolus vulgaris
Phvul.002G017900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1933277-1943276 Phaseolus vulgaris
Phvul.002G017900 10.0kb downstream 10.0kb downstream 21692 true Chr02: 1911585-1933276 Phaseolus vulgaris
Phvul.002G017900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1911585-1921584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305193 5265 Fabidae View MSA
124063602 5270 Rosid View MSA
123740668 5271 Pentapetalae View MSA
122786183 5272 Eudicot View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.563989 0.0 1.79616   Low
cufflinks 4.27895 0.0 11.2337    
cufflinks 2.40464 0.0 6.58489    
cufflinks 0.902625 0.0 2.75662   Low
cufflinks 2.93833 0.0 7.94456    
cufflinks 5.76637 0.0 14.9548    
cufflinks 4.98445 0.0 12.9775    
cufflinks 5.90648 0.0 15.2987   High
cufflinks 4.26444 0.0 11.1999    
cufflinks 0.689934 0.0 2.1561   Low
cufflinks 2.52472 0.0 6.90471    

0 Strain