Gene : Phvul.002G003200 P. vulgaris v2.1
Genomic Order:  30 Name:  ? Phvul.002G003200
Secondary Identifier:  ? PAC:37174826
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G003200 0.5kb upstream 0.5kb upstream 16369 true Chr02: 418811-435179 Phaseolus vulgaris
Phvul.002G003200 0.5kb upstream 0.5kb upstream 500 false Chr02: 434680-435179 Phaseolus vulgaris
Phvul.002G003200 0.5kb downstream 0.5kb downstream 16369 true Chr02: 418311-434679 Phaseolus vulgaris
Phvul.002G003200 0.5kb downstream 0.5kb downstream 500 false Chr02: 418311-418810 Phaseolus vulgaris
Phvul.002G003200 1.0kb upstream 1.0kb upstream 16869 true Chr02: 418811-435679 Phaseolus vulgaris
Phvul.002G003200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 434680-435679 Phaseolus vulgaris
Phvul.002G003200 1.0kb downstream 1.0kb downstream 16869 true Chr02: 417811-434679 Phaseolus vulgaris
Phvul.002G003200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 417811-418810 Phaseolus vulgaris
Phvul.002G003200 2.0kb upstream 2.0kb upstream 17869 true Chr02: 418811-436679 Phaseolus vulgaris
Phvul.002G003200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 434680-436679 Phaseolus vulgaris
Phvul.002G003200 2.0kb downstream 2.0kb downstream 17869 true Chr02: 416811-434679 Phaseolus vulgaris
Phvul.002G003200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 416811-418810 Phaseolus vulgaris
Phvul.002G003200 5.0kb upstream 5.0kb upstream 20869 true Chr02: 418811-439679 Phaseolus vulgaris
Phvul.002G003200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 434680-439679 Phaseolus vulgaris
Phvul.002G003200 5.0kb downstream 5.0kb downstream 20869 true Chr02: 413811-434679 Phaseolus vulgaris
Phvul.002G003200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 413811-418810 Phaseolus vulgaris
Phvul.002G003200 10.0kb upstream 10.0kb upstream 25869 true Chr02: 418811-444679 Phaseolus vulgaris
Phvul.002G003200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 434680-444679 Phaseolus vulgaris
Phvul.002G003200 10.0kb downstream 10.0kb downstream 25869 true Chr02: 408811-434679 Phaseolus vulgaris
Phvul.002G003200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 408811-418810 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251241 5265 Fabidae Singleton cluster - no MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81251 0.0 7.87026   Low
cufflinks 7.22119 0.0 26.1657    
cufflinks 8.73564 0.0 33.3625    
cufflinks 3.71676 0.0 17.3046   Low
cufflinks 8.87056 0.0 32.4324    
cufflinks 10.6934 0.0 43.2348    
cufflinks 16.6597 0.0 72.4757    
cufflinks 22.3127 0.0 100.167   High
cufflinks 14.4815 0.0 63.9872    
cufflinks 14.0774 0.0 58.2133    
cufflinks 8.88369 0.0 36.8955    

0 Strain