Gene : Phvul.002G004700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Genomic Order:  45
Name:  ? Phvul.002G004700 Secondary Identifier:  ? PAC:37176870
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G004700 0.5kb upstream 0.5kb upstream 4620 true Chr02: 523953-528572 Phaseolus vulgaris
Phvul.002G004700 0.5kb upstream 0.5kb upstream 500 false Chr02: 523953-524452 Phaseolus vulgaris
Phvul.002G004700 0.5kb downstream 0.5kb downstream 4620 true Chr02: 524453-529072 Phaseolus vulgaris
Phvul.002G004700 0.5kb downstream 0.5kb downstream 500 false Chr02: 528573-529072 Phaseolus vulgaris
Phvul.002G004700 1.0kb upstream 1.0kb upstream 5120 true Chr02: 523453-528572 Phaseolus vulgaris
Phvul.002G004700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 523453-524452 Phaseolus vulgaris
Phvul.002G004700 1.0kb downstream 1.0kb downstream 5120 true Chr02: 524453-529572 Phaseolus vulgaris
Phvul.002G004700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 528573-529572 Phaseolus vulgaris
Phvul.002G004700 2.0kb upstream 2.0kb upstream 6120 true Chr02: 522453-528572 Phaseolus vulgaris
Phvul.002G004700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 522453-524452 Phaseolus vulgaris
Phvul.002G004700 2.0kb downstream 2.0kb downstream 6120 true Chr02: 524453-530572 Phaseolus vulgaris
Phvul.002G004700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 528573-530572 Phaseolus vulgaris
Phvul.002G004700 5.0kb upstream 5.0kb upstream 9120 true Chr02: 519453-528572 Phaseolus vulgaris
Phvul.002G004700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 519453-524452 Phaseolus vulgaris
Phvul.002G004700 5.0kb downstream 5.0kb downstream 9120 true Chr02: 524453-533572 Phaseolus vulgaris
Phvul.002G004700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 528573-533572 Phaseolus vulgaris
Phvul.002G004700 10.0kb upstream 10.0kb upstream 14120 true Chr02: 514453-528572 Phaseolus vulgaris
Phvul.002G004700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 514453-524452 Phaseolus vulgaris
Phvul.002G004700 10.0kb downstream 10.0kb downstream 14120 true Chr02: 524453-538572 Phaseolus vulgaris
Phvul.002G004700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 528573-538572 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303508 5265 Fabidae View MSA
124062152 5270 Rosid View MSA
123738040 5271 Pentapetalae View MSA
122785775 5272 Eudicot View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83992 0.0 8.65906   Low
cufflinks 4.63435 0.0 13.412    
cufflinks 5.00931 0.0 14.3273    
cufflinks 4.21827 0.0 12.443    
cufflinks 5.70852 0.0 16.2421    
cufflinks 4.59174 0.0 13.2843    
cufflinks 4.63232 0.0 13.3911    
cufflinks 5.69964 0.0 16.0796    
cufflinks 4.78617 0.0 13.8065    
cufflinks 4.16621 0.0 12.222    
cufflinks 6.0473 0.0 17.098   High

0 Strain