Gene : Phvul.002G005000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Genomic Order:  48
Name:  ? Phvul.002G005000 Secondary Identifier:  ? PAC:37176706
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G005000 0.5kb upstream 0.5kb upstream 5152 true Chr02: 552087-557238 Phaseolus vulgaris
Phvul.002G005000 0.5kb upstream 0.5kb upstream 500 false Chr02: 552087-552586 Phaseolus vulgaris
Phvul.002G005000 0.5kb downstream 0.5kb downstream 5152 true Chr02: 552587-557738 Phaseolus vulgaris
Phvul.002G005000 0.5kb downstream 0.5kb downstream 500 false Chr02: 557239-557738 Phaseolus vulgaris
Phvul.002G005000 1.0kb upstream 1.0kb upstream 5652 true Chr02: 551587-557238 Phaseolus vulgaris
Phvul.002G005000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 551587-552586 Phaseolus vulgaris
Phvul.002G005000 1.0kb downstream 1.0kb downstream 5652 true Chr02: 552587-558238 Phaseolus vulgaris
Phvul.002G005000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 557239-558238 Phaseolus vulgaris
Phvul.002G005000 2.0kb upstream 2.0kb upstream 6652 true Chr02: 550587-557238 Phaseolus vulgaris
Phvul.002G005000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 550587-552586 Phaseolus vulgaris
Phvul.002G005000 2.0kb downstream 2.0kb downstream 6652 true Chr02: 552587-559238 Phaseolus vulgaris
Phvul.002G005000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 557239-559238 Phaseolus vulgaris
Phvul.002G005000 5.0kb upstream 5.0kb upstream 9652 true Chr02: 547587-557238 Phaseolus vulgaris
Phvul.002G005000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 547587-552586 Phaseolus vulgaris
Phvul.002G005000 5.0kb downstream 5.0kb downstream 9652 true Chr02: 552587-562238 Phaseolus vulgaris
Phvul.002G005000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 557239-562238 Phaseolus vulgaris
Phvul.002G005000 10.0kb upstream 10.0kb upstream 14652 true Chr02: 542587-557238 Phaseolus vulgaris
Phvul.002G005000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 542587-552586 Phaseolus vulgaris
Phvul.002G005000 10.0kb downstream 10.0kb downstream 14652 true Chr02: 552587-567238 Phaseolus vulgaris
Phvul.002G005000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 557239-567238 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314300 5265 Fabidae View MSA
124065519 5270 Rosid View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.26056 0.0 23.1755    
cufflinks 9.60167 0.0 26.6535    
cufflinks 7.40271 0.0 20.9933    
cufflinks 20.7899 0.0 54.644   High
cufflinks 8.80823 0.0 24.7556    
cufflinks 7.36874 0.0 20.9405    
cufflinks 11.727 0.0 31.9875    
cufflinks 15.6926 0.0 41.6733   High
cufflinks 11.8962 0.0 32.5239    
cufflinks 3.75688 0.0 11.5291   Low
cufflinks 10.4617 0.0 28.9565    

0 Strain