Gene : Phvul.002G006200 P. vulgaris v2.1
Defline:  (1 of 1) K09015 - Fe-S cluster assembly protein SufD (sufD) Genomic Order:  59
Name:  ? Phvul.002G006200 Secondary Identifier:  ? PAC:37175083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G006200 0.5kb upstream 0.5kb upstream 3024 true Chr02: 663085-666108 Phaseolus vulgaris
Phvul.002G006200 0.5kb upstream 0.5kb upstream 500 false Chr02: 665609-666108 Phaseolus vulgaris
Phvul.002G006200 0.5kb downstream 0.5kb downstream 3024 true Chr02: 662585-665608 Phaseolus vulgaris
Phvul.002G006200 0.5kb downstream 0.5kb downstream 500 false Chr02: 662585-663084 Phaseolus vulgaris
Phvul.002G006200 1.0kb upstream 1.0kb upstream 3524 true Chr02: 663085-666608 Phaseolus vulgaris
Phvul.002G006200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 665609-666608 Phaseolus vulgaris
Phvul.002G006200 1.0kb downstream 1.0kb downstream 3524 true Chr02: 662085-665608 Phaseolus vulgaris
Phvul.002G006200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 662085-663084 Phaseolus vulgaris
Phvul.002G006200 2.0kb upstream 2.0kb upstream 4524 true Chr02: 663085-667608 Phaseolus vulgaris
Phvul.002G006200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 665609-667608 Phaseolus vulgaris
Phvul.002G006200 2.0kb downstream 2.0kb downstream 4524 true Chr02: 661085-665608 Phaseolus vulgaris
Phvul.002G006200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 661085-663084 Phaseolus vulgaris
Phvul.002G006200 5.0kb upstream 5.0kb upstream 7524 true Chr02: 663085-670608 Phaseolus vulgaris
Phvul.002G006200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 665609-670608 Phaseolus vulgaris
Phvul.002G006200 5.0kb downstream 5.0kb downstream 7524 true Chr02: 658085-665608 Phaseolus vulgaris
Phvul.002G006200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 658085-663084 Phaseolus vulgaris
Phvul.002G006200 10.0kb upstream 10.0kb upstream 12524 true Chr02: 663085-675608 Phaseolus vulgaris
Phvul.002G006200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 665609-675608 Phaseolus vulgaris
Phvul.002G006200 10.0kb downstream 10.0kb downstream 12524 true Chr02: 653085-665608 Phaseolus vulgaris
Phvul.002G006200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 653085-663084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305232 5265 Fabidae View MSA
124065594 5270 Rosid View MSA
123740896 5271 Pentapetalae View MSA
122791232 5272 Eudicot View MSA
122051474 5273 Angiosperm View MSA
121345946 5274 Embryophyte View MSA
123424242 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.4777 0.0 127.315 High  
cufflinks 29.7151 0.0 76.822    
cufflinks 72.6688 0.0 196.1 High High
cufflinks 53.3531 0.0 141.575 High  
cufflinks 33.512 0.0 86.8992 High  
cufflinks 52.9024 0.0 139.497 High  
cufflinks 19.916 0.0 51.6122   Low
cufflinks 15.6471 0.0 40.987   Low
cufflinks 23.0865 0.0 59.7156    
cufflinks 41.7069 0.0 108.649 High  
cufflinks 29.8095 0.0 77.0883    

0 Strain