Gene : Phvul.002G006100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13832:SF340 - PROTEIN PHOSPHATASE 2C 29 Genomic Order:  58
Name:  ? Phvul.002G006100 Secondary Identifier:  ? PAC:37174728
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G006100 0.5kb upstream 0.5kb upstream 6054 true Chr02: 655931-661984 Phaseolus vulgaris
Phvul.002G006100 0.5kb upstream 0.5kb upstream 500 false Chr02: 655931-656430 Phaseolus vulgaris
Phvul.002G006100 0.5kb downstream 0.5kb downstream 6054 true Chr02: 656431-662484 Phaseolus vulgaris
Phvul.002G006100 0.5kb downstream 0.5kb downstream 500 false Chr02: 661985-662484 Phaseolus vulgaris
Phvul.002G006100 1.0kb upstream 1.0kb upstream 6554 true Chr02: 655431-661984 Phaseolus vulgaris
Phvul.002G006100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 655431-656430 Phaseolus vulgaris
Phvul.002G006100 1.0kb downstream 1.0kb downstream 6554 true Chr02: 656431-662984 Phaseolus vulgaris
Phvul.002G006100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 661985-662984 Phaseolus vulgaris
Phvul.002G006100 2.0kb upstream 2.0kb upstream 7554 true Chr02: 654431-661984 Phaseolus vulgaris
Phvul.002G006100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 654431-656430 Phaseolus vulgaris
Phvul.002G006100 2.0kb downstream 2.0kb downstream 7554 true Chr02: 656431-663984 Phaseolus vulgaris
Phvul.002G006100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 661985-663984 Phaseolus vulgaris
Phvul.002G006100 5.0kb upstream 5.0kb upstream 10554 true Chr02: 651431-661984 Phaseolus vulgaris
Phvul.002G006100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 651431-656430 Phaseolus vulgaris
Phvul.002G006100 5.0kb downstream 5.0kb downstream 10554 true Chr02: 656431-666984 Phaseolus vulgaris
Phvul.002G006100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 661985-666984 Phaseolus vulgaris
Phvul.002G006100 10.0kb upstream 10.0kb upstream 15554 true Chr02: 646431-661984 Phaseolus vulgaris
Phvul.002G006100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 646431-656430 Phaseolus vulgaris
Phvul.002G006100 10.0kb downstream 10.0kb downstream 15554 true Chr02: 656431-671984 Phaseolus vulgaris
Phvul.002G006100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 661985-671984 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122310977 5265 Fabidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02779 0.0 3.1314   Low
cufflinks 5.42291 0.0 14.1868   High
cufflinks 0.874568 0.0 2.72756   Low
cufflinks 1.92915 0.0 5.52876    
cufflinks 3.98025 0.0 10.6195    
cufflinks 3.51991 0.0 9.47194    
cufflinks 3.45266 0.0 9.24152    
cufflinks 3.44752 0.0 9.2786    
cufflinks 2.27818 0.0 6.34114    
cufflinks 1.16532 0.0 3.49512   Low
cufflinks 4.35885 0.0 11.5143    

0 Strain