Gene : Phvul.002G010600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  103
Name:  ? Phvul.002G010600 Secondary Identifier:  ? PAC:37178562
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G010600 0.5kb upstream 0.5kb upstream 4643 true Chr02: 1168256-1172898 Phaseolus vulgaris
Phvul.002G010600 0.5kb upstream 0.5kb upstream 500 false Chr02: 1168256-1168755 Phaseolus vulgaris
Phvul.002G010600 0.5kb downstream 0.5kb downstream 4643 true Chr02: 1168756-1173398 Phaseolus vulgaris
Phvul.002G010600 0.5kb downstream 0.5kb downstream 500 false Chr02: 1172899-1173398 Phaseolus vulgaris
Phvul.002G010600 1.0kb upstream 1.0kb upstream 5143 true Chr02: 1167756-1172898 Phaseolus vulgaris
Phvul.002G010600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1167756-1168755 Phaseolus vulgaris
Phvul.002G010600 1.0kb downstream 1.0kb downstream 5143 true Chr02: 1168756-1173898 Phaseolus vulgaris
Phvul.002G010600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1172899-1173898 Phaseolus vulgaris
Phvul.002G010600 2.0kb upstream 2.0kb upstream 6143 true Chr02: 1166756-1172898 Phaseolus vulgaris
Phvul.002G010600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1166756-1168755 Phaseolus vulgaris
Phvul.002G010600 2.0kb downstream 2.0kb downstream 6143 true Chr02: 1168756-1174898 Phaseolus vulgaris
Phvul.002G010600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1172899-1174898 Phaseolus vulgaris
Phvul.002G010600 5.0kb upstream 5.0kb upstream 9143 true Chr02: 1163756-1172898 Phaseolus vulgaris
Phvul.002G010600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1163756-1168755 Phaseolus vulgaris
Phvul.002G010600 5.0kb downstream 5.0kb downstream 9143 true Chr02: 1168756-1177898 Phaseolus vulgaris
Phvul.002G010600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1172899-1177898 Phaseolus vulgaris
Phvul.002G010600 10.0kb upstream 10.0kb upstream 14143 true Chr02: 1158756-1172898 Phaseolus vulgaris
Phvul.002G010600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1158756-1168755 Phaseolus vulgaris
Phvul.002G010600 10.0kb downstream 10.0kb downstream 14143 true Chr02: 1168756-1182898 Phaseolus vulgaris
Phvul.002G010600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1172899-1182898 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122307807 5265 Fabidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73962 0.0 10.6624   Low
cufflinks 6.03191 0.0 16.4721    
cufflinks 5.13724 0.0 14.1982    
cufflinks 6.7626 0.0 18.391    
cufflinks 6.31127 0.0 17.2668    
cufflinks 5.86138 0.0 16.0233    
cufflinks 6.90387 0.0 18.6085    
cufflinks 4.21334 0.0 11.8173   Low
cufflinks 6.00519 0.0 16.3953    
cufflinks 8.02612 0.0 21.443   High
cufflinks 8.13964 0.0 21.7783   High

0 Strain