Gene : Phvul.002G008900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  86
Name:  ? Phvul.002G008900 Secondary Identifier:  ? PAC:37178570
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G008900 0.5kb upstream 0.5kb upstream 2698 true Chr02: 983996-986693 Phaseolus vulgaris
Phvul.002G008900 0.5kb upstream 0.5kb upstream 500 false Chr02: 986194-986693 Phaseolus vulgaris
Phvul.002G008900 0.5kb downstream 0.5kb downstream 2698 true Chr02: 983496-986193 Phaseolus vulgaris
Phvul.002G008900 0.5kb downstream 0.5kb downstream 500 false Chr02: 983496-983995 Phaseolus vulgaris
Phvul.002G008900 1.0kb upstream 1.0kb upstream 3198 true Chr02: 983996-987193 Phaseolus vulgaris
Phvul.002G008900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 986194-987193 Phaseolus vulgaris
Phvul.002G008900 1.0kb downstream 1.0kb downstream 3198 true Chr02: 982996-986193 Phaseolus vulgaris
Phvul.002G008900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 982996-983995 Phaseolus vulgaris
Phvul.002G008900 2.0kb upstream 2.0kb upstream 4198 true Chr02: 983996-988193 Phaseolus vulgaris
Phvul.002G008900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 986194-988193 Phaseolus vulgaris
Phvul.002G008900 2.0kb downstream 2.0kb downstream 4198 true Chr02: 981996-986193 Phaseolus vulgaris
Phvul.002G008900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 981996-983995 Phaseolus vulgaris
Phvul.002G008900 5.0kb upstream 5.0kb upstream 7198 true Chr02: 983996-991193 Phaseolus vulgaris
Phvul.002G008900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 986194-991193 Phaseolus vulgaris
Phvul.002G008900 5.0kb downstream 5.0kb downstream 7198 true Chr02: 978996-986193 Phaseolus vulgaris
Phvul.002G008900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 978996-983995 Phaseolus vulgaris
Phvul.002G008900 10.0kb upstream 10.0kb upstream 12198 true Chr02: 983996-996193 Phaseolus vulgaris
Phvul.002G008900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 986194-996193 Phaseolus vulgaris
Phvul.002G008900 10.0kb downstream 10.0kb downstream 12198 true Chr02: 973996-986193 Phaseolus vulgaris
Phvul.002G008900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 973996-983995 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.212831 0.0 0.847371 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0369377 0.0 0.172525 Low  
cufflinks 0.0374925 0.0 0.174158 Low  
cufflinks 0.0720734 0.0 0.315672 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0673803 0.0 0.294762 Low  
cufflinks 0.0506531 0.0 0.228137 Low  
cufflinks 0.0242136 0.0 0.117609 Low  
cufflinks 0.0217085 0.0 0.107154 Low  
cufflinks 0.840689 0.0 2.98326   High

0 Strain