Gene : Phvul.002G010100 P. vulgaris v2.1
Defline:  (1 of 2) PF10225 - Uncharacterized conserved protein (DUF2215) (DUF2215) Genomic Order:  98
Name:  ? Phvul.002G010100 Secondary Identifier:  ? PAC:37176961
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G010100 0.5kb upstream 0.5kb upstream 8120 true Chr02: 1118971-1127090 Phaseolus vulgaris
Phvul.002G010100 0.5kb upstream 0.5kb upstream 500 false Chr02: 1118971-1119470 Phaseolus vulgaris
Phvul.002G010100 0.5kb downstream 0.5kb downstream 8120 true Chr02: 1119471-1127590 Phaseolus vulgaris
Phvul.002G010100 0.5kb downstream 0.5kb downstream 500 false Chr02: 1127091-1127590 Phaseolus vulgaris
Phvul.002G010100 1.0kb upstream 1.0kb upstream 8620 true Chr02: 1118471-1127090 Phaseolus vulgaris
Phvul.002G010100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1118471-1119470 Phaseolus vulgaris
Phvul.002G010100 1.0kb downstream 1.0kb downstream 8620 true Chr02: 1119471-1128090 Phaseolus vulgaris
Phvul.002G010100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1127091-1128090 Phaseolus vulgaris
Phvul.002G010100 2.0kb upstream 2.0kb upstream 9620 true Chr02: 1117471-1127090 Phaseolus vulgaris
Phvul.002G010100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1117471-1119470 Phaseolus vulgaris
Phvul.002G010100 2.0kb downstream 2.0kb downstream 9620 true Chr02: 1119471-1129090 Phaseolus vulgaris
Phvul.002G010100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1127091-1129090 Phaseolus vulgaris
Phvul.002G010100 5.0kb upstream 5.0kb upstream 12620 true Chr02: 1114471-1127090 Phaseolus vulgaris
Phvul.002G010100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1114471-1119470 Phaseolus vulgaris
Phvul.002G010100 5.0kb downstream 5.0kb downstream 12620 true Chr02: 1119471-1132090 Phaseolus vulgaris
Phvul.002G010100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1127091-1132090 Phaseolus vulgaris
Phvul.002G010100 10.0kb upstream 10.0kb upstream 17620 true Chr02: 1109471-1127090 Phaseolus vulgaris
Phvul.002G010100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1109471-1119470 Phaseolus vulgaris
Phvul.002G010100 10.0kb downstream 10.0kb downstream 17620 true Chr02: 1119471-1137090 Phaseolus vulgaris
Phvul.002G010100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1127091-1137090 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302030 5265 Fabidae View MSA
124050479 5270 Rosid View MSA
123740101 5271 Pentapetalae View MSA
122787191 5272 Eudicot View MSA
122042001 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42105 0.0 12.9376    
cufflinks 5.28586 0.0 15.2127    
cufflinks 4.98575 0.0 14.4104    
cufflinks 6.21478 0.0 17.6696   High
cufflinks 3.69067 0.0 11.0999   Low
cufflinks 5.28765 0.0 15.2226    
cufflinks 4.65501 0.0 13.5965    
cufflinks 6.28685 0.0 17.7362   High
cufflinks 4.50665 0.0 13.2559    
cufflinks 4.79677 0.0 13.9295    
cufflinks 4.6721 0.0 13.6792    

0 Strain