Gene : Phvul.001G267600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2658
Name:  ? Phvul.001G267600 Secondary Identifier:  ? PAC:37168818
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G267600 0.5kb upstream 0.5kb upstream 6206 true Chr01: 51276757-51282962 Phaseolus vulgaris
Phvul.001G267600 0.5kb upstream 0.5kb upstream 500 false Chr01: 51282463-51282962 Phaseolus vulgaris
Phvul.001G267600 0.5kb downstream 0.5kb downstream 6206 true Chr01: 51276257-51282462 Phaseolus vulgaris
Phvul.001G267600 0.5kb downstream 0.5kb downstream 500 false Chr01: 51276257-51276756 Phaseolus vulgaris
Phvul.001G267600 1.0kb upstream 1.0kb upstream 6706 true Chr01: 51276757-51283462 Phaseolus vulgaris
Phvul.001G267600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51282463-51283462 Phaseolus vulgaris
Phvul.001G267600 1.0kb downstream 1.0kb downstream 6706 true Chr01: 51275757-51282462 Phaseolus vulgaris
Phvul.001G267600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51275757-51276756 Phaseolus vulgaris
Phvul.001G267600 2.0kb upstream 2.0kb upstream 7706 true Chr01: 51276757-51284462 Phaseolus vulgaris
Phvul.001G267600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51282463-51284462 Phaseolus vulgaris
Phvul.001G267600 2.0kb downstream 2.0kb downstream 7706 true Chr01: 51274757-51282462 Phaseolus vulgaris
Phvul.001G267600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51274757-51276756 Phaseolus vulgaris
Phvul.001G267600 5.0kb upstream 5.0kb upstream 10706 true Chr01: 51276757-51287462 Phaseolus vulgaris
Phvul.001G267600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51282463-51287462 Phaseolus vulgaris
Phvul.001G267600 5.0kb downstream 5.0kb downstream 10706 true Chr01: 51271757-51282462 Phaseolus vulgaris
Phvul.001G267600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51271757-51276756 Phaseolus vulgaris
Phvul.001G267600 10.0kb upstream 10.0kb upstream 15706 true Chr01: 51276757-51292462 Phaseolus vulgaris
Phvul.001G267600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51282463-51292462 Phaseolus vulgaris
Phvul.001G267600 10.0kb downstream 10.0kb downstream 15706 true Chr01: 51266757-51282462 Phaseolus vulgaris
Phvul.001G267600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51266757-51276756 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297611 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.25877 0.0 21.1679   Low
cufflinks 3.49133 0.0 27.768    
cufflinks 4.69292 0.0 23.0041    
cufflinks 2.94869 0.0 22.9449   Low
cufflinks 4.99842 0.0 26.8261    
cufflinks 4.65798 0.0 21.0076    
cufflinks 5.07386 0.0 24.1316    
cufflinks 4.04057 0.0 27.6158    
cufflinks 5.09404 0.0 24.8094    
cufflinks 5.76332 0.0 32.5516   High
cufflinks 4.29089 0.0 22.0629    

0 Strain