Gene : Phvul.002G001300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10809:SF42 - VESICLE-ASSOCIATED PROTEIN 2-1 Genomic Order:  12
Name:  ? Phvul.002G001300 Secondary Identifier:  ? PAC:37174835
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G001300 0.5kb upstream 0.5kb upstream 4627 true Chr02: 89743-94369 Phaseolus vulgaris
Phvul.002G001300 0.5kb upstream 0.5kb upstream 500 false Chr02: 89743-90242 Phaseolus vulgaris
Phvul.002G001300 0.5kb downstream 0.5kb downstream 4627 true Chr02: 90243-94869 Phaseolus vulgaris
Phvul.002G001300 0.5kb downstream 0.5kb downstream 500 false Chr02: 94370-94869 Phaseolus vulgaris
Phvul.002G001300 1.0kb upstream 1.0kb upstream 5127 true Chr02: 89243-94369 Phaseolus vulgaris
Phvul.002G001300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 89243-90242 Phaseolus vulgaris
Phvul.002G001300 1.0kb downstream 1.0kb downstream 5127 true Chr02: 90243-95369 Phaseolus vulgaris
Phvul.002G001300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 94370-95369 Phaseolus vulgaris
Phvul.002G001300 2.0kb upstream 2.0kb upstream 6127 true Chr02: 88243-94369 Phaseolus vulgaris
Phvul.002G001300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 88243-90242 Phaseolus vulgaris
Phvul.002G001300 2.0kb downstream 2.0kb downstream 6127 true Chr02: 90243-96369 Phaseolus vulgaris
Phvul.002G001300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 94370-96369 Phaseolus vulgaris
Phvul.002G001300 5.0kb upstream 5.0kb upstream 9127 true Chr02: 85243-94369 Phaseolus vulgaris
Phvul.002G001300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 85243-90242 Phaseolus vulgaris
Phvul.002G001300 5.0kb downstream 5.0kb downstream 9127 true Chr02: 90243-99369 Phaseolus vulgaris
Phvul.002G001300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 94370-99369 Phaseolus vulgaris
Phvul.002G001300 10.0kb upstream 10.0kb upstream 14127 true Chr02: 80243-94369 Phaseolus vulgaris
Phvul.002G001300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 80243-90242 Phaseolus vulgaris
Phvul.002G001300 10.0kb downstream 10.0kb downstream 14127 true Chr02: 90243-104369 Phaseolus vulgaris
Phvul.002G001300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 94370-104369 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314559 5265 Fabidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02106 0.0 3.75378    
cufflinks 2.57046 0.0 8.64108    
cufflinks 2.15264 0.0 7.34495    
cufflinks 2.88011 0.0 9.47728    
cufflinks 0.813775 0.0 3.05072   Low
cufflinks 3.2456 0.0 10.6066   High
cufflinks 0.663353 0.0 2.52452   Low
cufflinks 4.28322 0.0 13.5162   High
cufflinks 0.583879 0.0 2.24544   Low
cufflinks 1.70339 0.0 5.99446    
cufflinks 1.96684 0.0 6.81913    

0 Strain