Gene : Phvul.001G258900 P. vulgaris v2.1
Defline:  (1 of 3) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  2570
Name:  ? Phvul.001G258900 Secondary Identifier:  ? PAC:37170113
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G258900 0.5kb upstream 0.5kb upstream 2297 true Chr01: 50732332-50734628 Phaseolus vulgaris
Phvul.001G258900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50734129-50734628 Phaseolus vulgaris
Phvul.001G258900 0.5kb downstream 0.5kb downstream 2297 true Chr01: 50731832-50734128 Phaseolus vulgaris
Phvul.001G258900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50731832-50732331 Phaseolus vulgaris
Phvul.001G258900 1.0kb upstream 1.0kb upstream 2797 true Chr01: 50732332-50735128 Phaseolus vulgaris
Phvul.001G258900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50734129-50735128 Phaseolus vulgaris
Phvul.001G258900 1.0kb downstream 1.0kb downstream 2797 true Chr01: 50731332-50734128 Phaseolus vulgaris
Phvul.001G258900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50731332-50732331 Phaseolus vulgaris
Phvul.001G258900 2.0kb upstream 2.0kb upstream 3797 true Chr01: 50732332-50736128 Phaseolus vulgaris
Phvul.001G258900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50734129-50736128 Phaseolus vulgaris
Phvul.001G258900 2.0kb downstream 2.0kb downstream 3797 true Chr01: 50730332-50734128 Phaseolus vulgaris
Phvul.001G258900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50730332-50732331 Phaseolus vulgaris
Phvul.001G258900 5.0kb upstream 5.0kb upstream 6797 true Chr01: 50732332-50739128 Phaseolus vulgaris
Phvul.001G258900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50734129-50739128 Phaseolus vulgaris
Phvul.001G258900 5.0kb downstream 5.0kb downstream 6797 true Chr01: 50727332-50734128 Phaseolus vulgaris
Phvul.001G258900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50727332-50732331 Phaseolus vulgaris
Phvul.001G258900 10.0kb upstream 10.0kb upstream 11797 true Chr01: 50732332-50744128 Phaseolus vulgaris
Phvul.001G258900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50734129-50744128 Phaseolus vulgaris
Phvul.001G258900 10.0kb downstream 10.0kb downstream 11797 true Chr01: 50722332-50734128 Phaseolus vulgaris
Phvul.001G258900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50722332-50732331 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314388 5265 Fabidae View MSA
124070084 5270 Rosid View MSA
123746560 5271 Pentapetalae View MSA
122794120 5272 Eudicot View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.61033 0.0 21.8387    
cufflinks 0.833393 0.0 3.33613    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 26.387 0.0 74.6631   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.569466 0.0 2.34871   Low
cufflinks 3.34256 0.0 11.9151    
cufflinks 1.30959 0.0 5.05522    
cufflinks 4.06989 0.0 14.2352    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.817338 0.0 3.28344    

0 Strain