Gene : Phvul.001G259500 P. vulgaris v2.1
Defline:  (1 of 1) KOG3212 - Uncharacterized conserved protein related to IojAP Genomic Order:  2576
Name:  ? Phvul.001G259500 Secondary Identifier:  ? PAC:37169544
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G259500 0.5kb upstream 0.5kb upstream 3990 true Chr01: 50776066-50780055 Phaseolus vulgaris
Phvul.001G259500 0.5kb upstream 0.5kb upstream 500 false Chr01: 50779556-50780055 Phaseolus vulgaris
Phvul.001G259500 0.5kb downstream 0.5kb downstream 3990 true Chr01: 50775566-50779555 Phaseolus vulgaris
Phvul.001G259500 0.5kb downstream 0.5kb downstream 500 false Chr01: 50775566-50776065 Phaseolus vulgaris
Phvul.001G259500 1.0kb upstream 1.0kb upstream 4490 true Chr01: 50776066-50780555 Phaseolus vulgaris
Phvul.001G259500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50779556-50780555 Phaseolus vulgaris
Phvul.001G259500 1.0kb downstream 1.0kb downstream 4490 true Chr01: 50775066-50779555 Phaseolus vulgaris
Phvul.001G259500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50775066-50776065 Phaseolus vulgaris
Phvul.001G259500 2.0kb upstream 2.0kb upstream 5490 true Chr01: 50776066-50781555 Phaseolus vulgaris
Phvul.001G259500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50779556-50781555 Phaseolus vulgaris
Phvul.001G259500 2.0kb downstream 2.0kb downstream 5490 true Chr01: 50774066-50779555 Phaseolus vulgaris
Phvul.001G259500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50774066-50776065 Phaseolus vulgaris
Phvul.001G259500 5.0kb upstream 5.0kb upstream 8490 true Chr01: 50776066-50784555 Phaseolus vulgaris
Phvul.001G259500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50779556-50784555 Phaseolus vulgaris
Phvul.001G259500 5.0kb downstream 5.0kb downstream 8490 true Chr01: 50771066-50779555 Phaseolus vulgaris
Phvul.001G259500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50771066-50776065 Phaseolus vulgaris
Phvul.001G259500 10.0kb upstream 10.0kb upstream 13490 true Chr01: 50776066-50789555 Phaseolus vulgaris
Phvul.001G259500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50779556-50789555 Phaseolus vulgaris
Phvul.001G259500 10.0kb downstream 10.0kb downstream 13490 true Chr01: 50766066-50779555 Phaseolus vulgaris
Phvul.001G259500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50766066-50776065 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308437 5265 Fabidae View MSA
124063085 5270 Rosid View MSA
123749362 5271 Pentapetalae View MSA
122773108 5272 Eudicot View MSA
122047007 5273 Angiosperm View MSA
121349437 5274 Embryophyte View MSA
123381310 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.5242 0.0 65.195   High
cufflinks 15.5297 0.0 42.987    
cufflinks 14.2972 0.0 39.946    
cufflinks 26.7763 0.0 71.0263   High
cufflinks 14.8206 0.0 41.3476    
cufflinks 8.90313 0.0 26.0226   Low
cufflinks 14.007 0.0 39.0071    
cufflinks 16.7873 0.0 46.093    
cufflinks 18.0814 0.0 49.2114    
cufflinks 16.0312 0.0 44.2948    
cufflinks 20.0711 0.0 54.3799    

0 Strain