Gene : Phvul.001G259400 P. vulgaris v2.1
Defline:  (1 of 2) K00059 - 3-oxoacyl- (fabG) Genomic Order:  2575
Name:  ? Phvul.001G259400 Secondary Identifier:  ? PAC:37167997
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris FASYN-ELONG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5971 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5973 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5989 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6282 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7663 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G259400 0.5kb upstream 0.5kb upstream 4214 true Chr01: 50771062-50775275 Phaseolus vulgaris
Phvul.001G259400 0.5kb upstream 0.5kb upstream 500 false Chr01: 50774776-50775275 Phaseolus vulgaris
Phvul.001G259400 0.5kb downstream 0.5kb downstream 4214 true Chr01: 50770562-50774775 Phaseolus vulgaris
Phvul.001G259400 0.5kb downstream 0.5kb downstream 500 false Chr01: 50770562-50771061 Phaseolus vulgaris
Phvul.001G259400 1.0kb upstream 1.0kb upstream 4714 true Chr01: 50771062-50775775 Phaseolus vulgaris
Phvul.001G259400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50774776-50775775 Phaseolus vulgaris
Phvul.001G259400 1.0kb downstream 1.0kb downstream 4714 true Chr01: 50770062-50774775 Phaseolus vulgaris
Phvul.001G259400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50770062-50771061 Phaseolus vulgaris
Phvul.001G259400 2.0kb upstream 2.0kb upstream 5714 true Chr01: 50771062-50776775 Phaseolus vulgaris
Phvul.001G259400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50774776-50776775 Phaseolus vulgaris
Phvul.001G259400 2.0kb downstream 2.0kb downstream 5714 true Chr01: 50769062-50774775 Phaseolus vulgaris
Phvul.001G259400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50769062-50771061 Phaseolus vulgaris
Phvul.001G259400 5.0kb upstream 5.0kb upstream 8714 true Chr01: 50771062-50779775 Phaseolus vulgaris
Phvul.001G259400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50774776-50779775 Phaseolus vulgaris
Phvul.001G259400 5.0kb downstream 5.0kb downstream 8714 true Chr01: 50766062-50774775 Phaseolus vulgaris
Phvul.001G259400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50766062-50771061 Phaseolus vulgaris
Phvul.001G259400 10.0kb upstream 10.0kb upstream 13714 true Chr01: 50771062-50784775 Phaseolus vulgaris
Phvul.001G259400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50774776-50784775 Phaseolus vulgaris
Phvul.001G259400 10.0kb downstream 10.0kb downstream 13714 true Chr01: 50761062-50774775 Phaseolus vulgaris
Phvul.001G259400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50761062-50771061 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307100 5265 Fabidae View MSA
124071251 5270 Rosid View MSA
123740776 5271 Pentapetalae View MSA
122787296 5272 Eudicot View MSA
122042809 5273 Angiosperm View MSA
121347149 5274 Embryophyte View MSA
123428494 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.1464 0.0 85.9103 High  
cufflinks 63.9893 0.0 171.376 High  
cufflinks 59.6288 0.0 158.844 High  
cufflinks 113.084 0.0 317.966 High High
cufflinks 43.4843 0.0 113.455 High  
cufflinks 64.0309 0.0 171.472 High  
cufflinks 22.1445 0.0 57.3325   Low
cufflinks 22.8757 0.0 59.181   Low
cufflinks 33.9288 0.0 87.8712 High  
cufflinks 24.9575 0.0 64.5217   Low
cufflinks 54.9441 0.0 145.297 High  

0 Strain