Gene : Phvul.001G261000 P. vulgaris v2.1
Defline:  (1 of 3) K02880 - large subunit ribosomal protein L17e (RP-L17e, RPL17) Genomic Order:  2591
Name:  ? Phvul.001G261000 Secondary Identifier:  ? PAC:37169913
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G261000 0.5kb upstream 0.5kb upstream 2424 true Chr01: 50872503-50874926 Phaseolus vulgaris
Phvul.001G261000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50874427-50874926 Phaseolus vulgaris
Phvul.001G261000 0.5kb downstream 0.5kb downstream 2424 true Chr01: 50872003-50874426 Phaseolus vulgaris
Phvul.001G261000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50872003-50872502 Phaseolus vulgaris
Phvul.001G261000 1.0kb upstream 1.0kb upstream 2924 true Chr01: 50872503-50875426 Phaseolus vulgaris
Phvul.001G261000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50874427-50875426 Phaseolus vulgaris
Phvul.001G261000 1.0kb downstream 1.0kb downstream 2924 true Chr01: 50871503-50874426 Phaseolus vulgaris
Phvul.001G261000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50871503-50872502 Phaseolus vulgaris
Phvul.001G261000 2.0kb upstream 2.0kb upstream 3924 true Chr01: 50872503-50876426 Phaseolus vulgaris
Phvul.001G261000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50874427-50876426 Phaseolus vulgaris
Phvul.001G261000 2.0kb downstream 2.0kb downstream 3924 true Chr01: 50870503-50874426 Phaseolus vulgaris
Phvul.001G261000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50870503-50872502 Phaseolus vulgaris
Phvul.001G261000 5.0kb upstream 5.0kb upstream 6924 true Chr01: 50872503-50879426 Phaseolus vulgaris
Phvul.001G261000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50874427-50879426 Phaseolus vulgaris
Phvul.001G261000 5.0kb downstream 5.0kb downstream 6924 true Chr01: 50867503-50874426 Phaseolus vulgaris
Phvul.001G261000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50867503-50872502 Phaseolus vulgaris
Phvul.001G261000 10.0kb upstream 10.0kb upstream 11924 true Chr01: 50872503-50884426 Phaseolus vulgaris
Phvul.001G261000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50874427-50884426 Phaseolus vulgaris
Phvul.001G261000 10.0kb downstream 10.0kb downstream 11924 true Chr01: 50862503-50874426 Phaseolus vulgaris
Phvul.001G261000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50862503-50872502 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308747 5265 Fabidae View MSA
124061649 5270 Rosid View MSA
123752995 5271 Pentapetalae View MSA
122790046 5272 Eudicot View MSA
122051496 5273 Angiosperm View MSA
121350050 5274 Embryophyte View MSA
123424396 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 232.386 0.0 923.695 High  
cufflinks 335.693 0.0 1282.77 High  
cufflinks 163.778 0.0 599.673 High  
cufflinks 391.468 0.0 1235.49 High High
cufflinks 261.332 0.0 1078.82 High  
cufflinks 148.551 0.0 542.946 High Low
cufflinks 206.472 0.0 819.331 High  
cufflinks 266.411 0.0 1113.93 High  
cufflinks 307.967 0.0 1388.71 High  
cufflinks 114.757 0.0 392.45 High Low
cufflinks 289.707 0.0 1248.8 High  

0 Strain