Gene : Phvul.001G260000 P. vulgaris v2.1
Defline:  (1 of 1) K01427 - urease (URE) Genomic Order:  2581
Name:  ? Phvul.001G260000 Secondary Identifier:  ? PAC:37170205
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5704 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G260000 0.5kb upstream 0.5kb upstream 7665 true Chr01: 50812525-50820189 Phaseolus vulgaris
Phvul.001G260000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50819690-50820189 Phaseolus vulgaris
Phvul.001G260000 0.5kb downstream 0.5kb downstream 7665 true Chr01: 50812025-50819689 Phaseolus vulgaris
Phvul.001G260000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50812025-50812524 Phaseolus vulgaris
Phvul.001G260000 1.0kb upstream 1.0kb upstream 8165 true Chr01: 50812525-50820689 Phaseolus vulgaris
Phvul.001G260000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50819690-50820689 Phaseolus vulgaris
Phvul.001G260000 1.0kb downstream 1.0kb downstream 8165 true Chr01: 50811525-50819689 Phaseolus vulgaris
Phvul.001G260000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50811525-50812524 Phaseolus vulgaris
Phvul.001G260000 2.0kb upstream 2.0kb upstream 9165 true Chr01: 50812525-50821689 Phaseolus vulgaris
Phvul.001G260000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50819690-50821689 Phaseolus vulgaris
Phvul.001G260000 2.0kb downstream 2.0kb downstream 9165 true Chr01: 50810525-50819689 Phaseolus vulgaris
Phvul.001G260000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50810525-50812524 Phaseolus vulgaris
Phvul.001G260000 5.0kb upstream 5.0kb upstream 12165 true Chr01: 50812525-50824689 Phaseolus vulgaris
Phvul.001G260000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50819690-50824689 Phaseolus vulgaris
Phvul.001G260000 5.0kb downstream 5.0kb downstream 12165 true Chr01: 50807525-50819689 Phaseolus vulgaris
Phvul.001G260000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50807525-50812524 Phaseolus vulgaris
Phvul.001G260000 10.0kb upstream 10.0kb upstream 17165 true Chr01: 50812525-50829689 Phaseolus vulgaris
Phvul.001G260000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50819690-50829689 Phaseolus vulgaris
Phvul.001G260000 10.0kb downstream 10.0kb downstream 17165 true Chr01: 50802525-50819689 Phaseolus vulgaris
Phvul.001G260000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50802525-50812524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302667 5265 Fabidae View MSA
124068403 5270 Rosid View MSA
123740232 5271 Pentapetalae View MSA
122790945 5272 Eudicot View MSA
122047668 5273 Angiosperm View MSA
121343969 5274 Embryophyte View MSA
123425205 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1063 0.0 3.53854   Low
cufflinks 3.28656 0.0 9.30935    
cufflinks 1.51389 0.0 4.6586    
cufflinks 2.2291 0.0 6.65374    
cufflinks 1.62096 0.0 5.01758    
cufflinks 4.3163 0.0 11.9171    
cufflinks 8.99932 0.0 23.5455   High
cufflinks 6.51187 0.0 17.3086    
cufflinks 17.9484 0.0 46.4465   High
cufflinks 5.19843 0.0 14.1612    
cufflinks 2.01305 0.0 6.05746    

0 Strain