Gene : Phvul.001G262600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED Genomic Order:  2607
Name:  ? Phvul.001G262600 Secondary Identifier:  ? PAC:37171031
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G262600 0.5kb upstream 0.5kb upstream 4190 true Chr01: 50971750-50975939 Phaseolus vulgaris
Phvul.001G262600 0.5kb upstream 0.5kb upstream 500 false Chr01: 50975440-50975939 Phaseolus vulgaris
Phvul.001G262600 0.5kb downstream 0.5kb downstream 4190 true Chr01: 50971250-50975439 Phaseolus vulgaris
Phvul.001G262600 0.5kb downstream 0.5kb downstream 500 false Chr01: 50971250-50971749 Phaseolus vulgaris
Phvul.001G262600 1.0kb upstream 1.0kb upstream 4690 true Chr01: 50971750-50976439 Phaseolus vulgaris
Phvul.001G262600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50975440-50976439 Phaseolus vulgaris
Phvul.001G262600 1.0kb downstream 1.0kb downstream 4690 true Chr01: 50970750-50975439 Phaseolus vulgaris
Phvul.001G262600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50970750-50971749 Phaseolus vulgaris
Phvul.001G262600 2.0kb upstream 2.0kb upstream 5690 true Chr01: 50971750-50977439 Phaseolus vulgaris
Phvul.001G262600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50975440-50977439 Phaseolus vulgaris
Phvul.001G262600 2.0kb downstream 2.0kb downstream 5690 true Chr01: 50969750-50975439 Phaseolus vulgaris
Phvul.001G262600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50969750-50971749 Phaseolus vulgaris
Phvul.001G262600 5.0kb upstream 5.0kb upstream 8690 true Chr01: 50971750-50980439 Phaseolus vulgaris
Phvul.001G262600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50975440-50980439 Phaseolus vulgaris
Phvul.001G262600 5.0kb downstream 5.0kb downstream 8690 true Chr01: 50966750-50975439 Phaseolus vulgaris
Phvul.001G262600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50966750-50971749 Phaseolus vulgaris
Phvul.001G262600 10.0kb upstream 10.0kb upstream 13690 true Chr01: 50971750-50985439 Phaseolus vulgaris
Phvul.001G262600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50975440-50985439 Phaseolus vulgaris
Phvul.001G262600 10.0kb downstream 10.0kb downstream 13690 true Chr01: 50961750-50975439 Phaseolus vulgaris
Phvul.001G262600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50961750-50971749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027881 5273 Angiosperm View MSA
122305423 5265 Fabidae View MSA
124072041 5270 Rosid View MSA
123745065 5271 Pentapetalae View MSA
122789377 5272 Eudicot View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3165 0.0 27.6762    
cufflinks 43.306 0.0 113.386 High High
cufflinks 26.9116 0.0 69.5758    
cufflinks 12.4419 0.0 32.9721    
cufflinks 19.7517 0.0 51.2477    
cufflinks 41.3673 0.0 108.054 High High
cufflinks 2.24946 0.0 7.04254   Low
cufflinks 1.7098 0.0 5.50593   Low
cufflinks 1.79314 0.0 5.75963   Low
cufflinks 21.5412 0.0 55.7597    
cufflinks 14.1769 0.0 37.3308    

0 Strain