Gene : Phvul.001G261400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  2595
Name:  ? Phvul.001G261400 Secondary Identifier:  ? PAC:37170459
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G261400 0.5kb upstream 0.5kb upstream 4460 true Chr01: 50892106-50896565 Phaseolus vulgaris
Phvul.001G261400 0.5kb upstream 0.5kb upstream 500 false Chr01: 50892106-50892605 Phaseolus vulgaris
Phvul.001G261400 0.5kb downstream 0.5kb downstream 4460 true Chr01: 50892606-50897065 Phaseolus vulgaris
Phvul.001G261400 0.5kb downstream 0.5kb downstream 500 false Chr01: 50896566-50897065 Phaseolus vulgaris
Phvul.001G261400 1.0kb upstream 1.0kb upstream 4960 true Chr01: 50891606-50896565 Phaseolus vulgaris
Phvul.001G261400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50891606-50892605 Phaseolus vulgaris
Phvul.001G261400 1.0kb downstream 1.0kb downstream 4960 true Chr01: 50892606-50897565 Phaseolus vulgaris
Phvul.001G261400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50896566-50897565 Phaseolus vulgaris
Phvul.001G261400 2.0kb upstream 2.0kb upstream 5960 true Chr01: 50890606-50896565 Phaseolus vulgaris
Phvul.001G261400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50890606-50892605 Phaseolus vulgaris
Phvul.001G261400 2.0kb downstream 2.0kb downstream 5960 true Chr01: 50892606-50898565 Phaseolus vulgaris
Phvul.001G261400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50896566-50898565 Phaseolus vulgaris
Phvul.001G261400 5.0kb upstream 5.0kb upstream 8960 true Chr01: 50887606-50896565 Phaseolus vulgaris
Phvul.001G261400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50887606-50892605 Phaseolus vulgaris
Phvul.001G261400 5.0kb downstream 5.0kb downstream 8960 true Chr01: 50892606-50901565 Phaseolus vulgaris
Phvul.001G261400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50896566-50901565 Phaseolus vulgaris
Phvul.001G261400 10.0kb upstream 10.0kb upstream 13960 true Chr01: 50882606-50896565 Phaseolus vulgaris
Phvul.001G261400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50882606-50892605 Phaseolus vulgaris
Phvul.001G261400 10.0kb downstream 10.0kb downstream 13960 true Chr01: 50892606-50906565 Phaseolus vulgaris
Phvul.001G261400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50896566-50906565 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122310130 5265 Fabidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.65981 0.0 5.80063    
cufflinks 3.32877 0.0 10.7673    
cufflinks 1.14121 0.0 4.14156   Low
cufflinks 3.35226 0.0 10.9191    
cufflinks 2.31289 0.0 7.83543    
cufflinks 2.14641 0.0 7.2974    
cufflinks 2.10681 0.0 7.16444    
cufflinks 2.20079 0.0 7.4197    
cufflinks 3.10521 0.0 10.1243    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.85052 0.0 12.2884   High

0 Strain