Gene : Phvul.001G262200 P. vulgaris v2.1
Defline:  (1 of 2) PF04359 - Protein of unknown function (DUF493) (DUF493) Genomic Order:  2603
Name:  ? Phvul.001G262200 Secondary Identifier:  ? PAC:37168736
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G262200 0.5kb upstream 0.5kb upstream 4376 true Chr01: 50949875-50954250 Phaseolus vulgaris
Phvul.001G262200 0.5kb upstream 0.5kb upstream 500 false Chr01: 50949875-50950374 Phaseolus vulgaris
Phvul.001G262200 0.5kb downstream 0.5kb downstream 4376 true Chr01: 50950375-50954750 Phaseolus vulgaris
Phvul.001G262200 0.5kb downstream 0.5kb downstream 500 false Chr01: 50954251-50954750 Phaseolus vulgaris
Phvul.001G262200 1.0kb upstream 1.0kb upstream 4876 true Chr01: 50949375-50954250 Phaseolus vulgaris
Phvul.001G262200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50949375-50950374 Phaseolus vulgaris
Phvul.001G262200 1.0kb downstream 1.0kb downstream 4876 true Chr01: 50950375-50955250 Phaseolus vulgaris
Phvul.001G262200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50954251-50955250 Phaseolus vulgaris
Phvul.001G262200 2.0kb upstream 2.0kb upstream 5876 true Chr01: 50948375-50954250 Phaseolus vulgaris
Phvul.001G262200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50948375-50950374 Phaseolus vulgaris
Phvul.001G262200 2.0kb downstream 2.0kb downstream 5876 true Chr01: 50950375-50956250 Phaseolus vulgaris
Phvul.001G262200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50954251-50956250 Phaseolus vulgaris
Phvul.001G262200 5.0kb upstream 5.0kb upstream 8876 true Chr01: 50945375-50954250 Phaseolus vulgaris
Phvul.001G262200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50945375-50950374 Phaseolus vulgaris
Phvul.001G262200 5.0kb downstream 5.0kb downstream 8876 true Chr01: 50950375-50959250 Phaseolus vulgaris
Phvul.001G262200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50954251-50959250 Phaseolus vulgaris
Phvul.001G262200 10.0kb upstream 10.0kb upstream 13876 true Chr01: 50940375-50954250 Phaseolus vulgaris
Phvul.001G262200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50940375-50950374 Phaseolus vulgaris
Phvul.001G262200 10.0kb downstream 10.0kb downstream 13876 true Chr01: 50950375-50964250 Phaseolus vulgaris
Phvul.001G262200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50954251-50964250 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300890 5265 Fabidae View MSA
124062101 5270 Rosid View MSA
123739527 5271 Pentapetalae View MSA
122786727 5272 Eudicot View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4934 0.0 82.1734   High
cufflinks 11.4057 0.0 32.0728    
cufflinks 44.4691 0.0 115.007 High High
cufflinks 12.6122 0.0 35.3327    
cufflinks 8.60355 0.0 24.985    
cufflinks 16.0131 0.0 43.7212    
cufflinks 3.49685 0.0 11.1539   Low
cufflinks 4.46223 0.0 13.8674    
cufflinks 3.16785 0.0 10.2488   Low
cufflinks 11.2737 0.0 31.7537    
cufflinks 7.66565 0.0 22.4439    

0 Strain