Gene : Phvul.001G264400 P. vulgaris v2.1
Defline:  (1 of 2) K13899 - cystatin-C (CST3) Genomic Order:  2626
Name:  ? Phvul.001G264400 Secondary Identifier:  ? PAC:37170601
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G264400 0.5kb upstream 0.5kb upstream 893 true Chr01: 51087611-51088503 Phaseolus vulgaris
Phvul.001G264400 0.5kb upstream 0.5kb upstream 500 false Chr01: 51088004-51088503 Phaseolus vulgaris
Phvul.001G264400 0.5kb downstream 0.5kb downstream 893 true Chr01: 51087111-51088003 Phaseolus vulgaris
Phvul.001G264400 0.5kb downstream 0.5kb downstream 500 false Chr01: 51087111-51087610 Phaseolus vulgaris
Phvul.001G264400 1.0kb upstream 1.0kb upstream 1393 true Chr01: 51087611-51089003 Phaseolus vulgaris
Phvul.001G264400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51088004-51089003 Phaseolus vulgaris
Phvul.001G264400 1.0kb downstream 1.0kb downstream 1393 true Chr01: 51086611-51088003 Phaseolus vulgaris
Phvul.001G264400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51086611-51087610 Phaseolus vulgaris
Phvul.001G264400 2.0kb upstream 2.0kb upstream 2393 true Chr01: 51087611-51090003 Phaseolus vulgaris
Phvul.001G264400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51088004-51090003 Phaseolus vulgaris
Phvul.001G264400 2.0kb downstream 2.0kb downstream 2393 true Chr01: 51085611-51088003 Phaseolus vulgaris
Phvul.001G264400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51085611-51087610 Phaseolus vulgaris
Phvul.001G264400 5.0kb upstream 5.0kb upstream 5393 true Chr01: 51087611-51093003 Phaseolus vulgaris
Phvul.001G264400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51088004-51093003 Phaseolus vulgaris
Phvul.001G264400 5.0kb downstream 5.0kb downstream 5393 true Chr01: 51082611-51088003 Phaseolus vulgaris
Phvul.001G264400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51082611-51087610 Phaseolus vulgaris
Phvul.001G264400 10.0kb upstream 10.0kb upstream 10393 true Chr01: 51087611-51098003 Phaseolus vulgaris
Phvul.001G264400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51088004-51098003 Phaseolus vulgaris
Phvul.001G264400 10.0kb downstream 10.0kb downstream 10393 true Chr01: 51077611-51088003 Phaseolus vulgaris
Phvul.001G264400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51077611-51087610 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305178 5265 Fabidae View MSA
124069971 5270 Rosid View MSA
123746395 5271 Pentapetalae View MSA
122797180 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267055 0.0 1.22923 Low  
cufflinks 0.374855 0.0 1.66829 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.461365 0.0 2.02072 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0698958 0.0 0.373865 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain