Gene : Phvul.001G250000 P. vulgaris v2.1
Defline:  (1 of 1) K12875 - apoptotic chromatin condensation inducer in the nucleus (ACIN1, ACINUS) Genomic Order:  2480
Name:  ? Phvul.001G250000 Secondary Identifier:  ? PAC:37169775
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G250000 0.5kb upstream 0.5kb upstream 4388 true Chr01: 50070923-50075310 Phaseolus vulgaris
Phvul.001G250000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50074811-50075310 Phaseolus vulgaris
Phvul.001G250000 0.5kb downstream 0.5kb downstream 4388 true Chr01: 50070423-50074810 Phaseolus vulgaris
Phvul.001G250000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50070423-50070922 Phaseolus vulgaris
Phvul.001G250000 1.0kb upstream 1.0kb upstream 4888 true Chr01: 50070923-50075810 Phaseolus vulgaris
Phvul.001G250000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50074811-50075810 Phaseolus vulgaris
Phvul.001G250000 1.0kb downstream 1.0kb downstream 4888 true Chr01: 50069923-50074810 Phaseolus vulgaris
Phvul.001G250000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50069923-50070922 Phaseolus vulgaris
Phvul.001G250000 2.0kb upstream 2.0kb upstream 5888 true Chr01: 50070923-50076810 Phaseolus vulgaris
Phvul.001G250000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50074811-50076810 Phaseolus vulgaris
Phvul.001G250000 2.0kb downstream 2.0kb downstream 5888 true Chr01: 50068923-50074810 Phaseolus vulgaris
Phvul.001G250000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50068923-50070922 Phaseolus vulgaris
Phvul.001G250000 5.0kb upstream 5.0kb upstream 8888 true Chr01: 50070923-50079810 Phaseolus vulgaris
Phvul.001G250000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50074811-50079810 Phaseolus vulgaris
Phvul.001G250000 5.0kb downstream 5.0kb downstream 8888 true Chr01: 50065923-50074810 Phaseolus vulgaris
Phvul.001G250000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50065923-50070922 Phaseolus vulgaris
Phvul.001G250000 10.0kb upstream 10.0kb upstream 13888 true Chr01: 50070923-50084810 Phaseolus vulgaris
Phvul.001G250000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50074811-50084810 Phaseolus vulgaris
Phvul.001G250000 10.0kb downstream 10.0kb downstream 13888 true Chr01: 50060923-50074810 Phaseolus vulgaris
Phvul.001G250000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50060923-50070922 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300062 5265 Fabidae View MSA
124065977 5270 Rosid View MSA
123750098 5271 Pentapetalae View MSA
122794236 5272 Eudicot View MSA
122050139 5273 Angiosperm View MSA
121344528 5274 Embryophyte View MSA
123424051 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.547 0.0 58.9619   Low
cufflinks 41.6815 0.0 114.164 High  
cufflinks 43.2681 0.0 119.364 High  
cufflinks 19.147 0.0 49.6478   Low
cufflinks 35.0628 0.0 94.0464 High  
cufflinks 46.2035 0.0 128.118 High  
cufflinks 39.0197 0.0 106.642 High  
cufflinks 42.3746 0.0 116.92 High  
cufflinks 39.7142 0.0 108.534 High  
cufflinks 42.8603 0.0 117.514 High  
cufflinks 32.9955 0.0 88.2989    

0 Strain