Gene : Phvul.001G252500 P. vulgaris v2.1
Defline:  (1 of 6) PTHR10593//PTHR10593:SF41 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Genomic Order:  2505
Name:  ? Phvul.001G252500 Secondary Identifier:  ? PAC:37171225
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G252500 0.5kb upstream 0.5kb upstream 1972 true Chr01: 50283996-50285967 Phaseolus vulgaris
Phvul.001G252500 0.5kb upstream 0.5kb upstream 500 false Chr01: 50283996-50284495 Phaseolus vulgaris
Phvul.001G252500 0.5kb downstream 0.5kb downstream 1972 true Chr01: 50284496-50286467 Phaseolus vulgaris
Phvul.001G252500 0.5kb downstream 0.5kb downstream 500 false Chr01: 50285968-50286467 Phaseolus vulgaris
Phvul.001G252500 1.0kb upstream 1.0kb upstream 2472 true Chr01: 50283496-50285967 Phaseolus vulgaris
Phvul.001G252500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50283496-50284495 Phaseolus vulgaris
Phvul.001G252500 1.0kb downstream 1.0kb downstream 2472 true Chr01: 50284496-50286967 Phaseolus vulgaris
Phvul.001G252500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50285968-50286967 Phaseolus vulgaris
Phvul.001G252500 2.0kb upstream 2.0kb upstream 3472 true Chr01: 50282496-50285967 Phaseolus vulgaris
Phvul.001G252500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50282496-50284495 Phaseolus vulgaris
Phvul.001G252500 2.0kb downstream 2.0kb downstream 3472 true Chr01: 50284496-50287967 Phaseolus vulgaris
Phvul.001G252500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50285968-50287967 Phaseolus vulgaris
Phvul.001G252500 5.0kb upstream 5.0kb upstream 6472 true Chr01: 50279496-50285967 Phaseolus vulgaris
Phvul.001G252500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50279496-50284495 Phaseolus vulgaris
Phvul.001G252500 5.0kb downstream 5.0kb downstream 6472 true Chr01: 50284496-50290967 Phaseolus vulgaris
Phvul.001G252500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50285968-50290967 Phaseolus vulgaris
Phvul.001G252500 10.0kb upstream 10.0kb upstream 11472 true Chr01: 50274496-50285967 Phaseolus vulgaris
Phvul.001G252500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50274496-50284495 Phaseolus vulgaris
Phvul.001G252500 10.0kb downstream 10.0kb downstream 11472 true Chr01: 50284496-50295967 Phaseolus vulgaris
Phvul.001G252500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50285968-50295967 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299192 5265 Fabidae View MSA
124070921 5270 Rosid View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.43762 0.0 10.3612    
cufflinks 2.87543 0.0 8.852    
cufflinks 2.04374 0.0 6.60622   Low
cufflinks 7.704 0.0 21.12    
cufflinks 2.1518 0.0 6.81445   Low
cufflinks 4.9068 0.0 14.2284    
cufflinks 10.2801 0.0 27.5656   High
cufflinks 8.68553 0.0 23.8685   High
cufflinks 7.58837 0.0 20.8577    
cufflinks 3.63753 0.0 10.8736    
cufflinks 3.09567 0.0 9.36646    

0 Strain